Gene Bcav_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0065 
Symbol 
ID7858268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp69197 
End bp70729 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content70% 
IMG OID643864143 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_002880093 
Protein GI229818567 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3534] Alpha-L-arabinofuranosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCGCCCGCGC CGTCATCGAC CTCGACGTCC CCGGCCCCAC GATCAGCCGC 
CACCTGTACG GGCACTTCGC CGAGCACCTC GGGCGGTGCA TCTACGGCGG CTTCTGGGTG
GGCGAGGACT CGGACGTCCC GAACGAGGGC GGGATCCGGC TCGACGTCGT CGAGGCCCTC
CGCGCGCTGC AGATCCCGAA CCTGCGCTGG CCCGGCGGCT GCTTCGCCGA CGAGTACCAC
TGGCGCGACG GCATCGGCCC GCGCTCCGAG CGTCCGCGGA TGGTCAACAC GCACTGGGGC
GACGTCGTCG AGGACAACTC CTTCGGCACG CACGAGTTCA TGGCGCTGTG CGAGCTGCTC
GGCACCGAGC CGTACGTGAA CGGCAACGTC GGCTCCGGCA CGGTGCGCGA GATGAGCGAG
TGGGTCGAGT ACCTGACCCG CCCCGGCACG TCGCCCATGG CGGACCTGCG CCGCGCGAAC
GGCCGTGACG AGCCGTGGAA GGTTCCGTTC TGGGGCATCG GCAACGAGGC GTGGGGCTGC
GGCGGCAACA TGCGCGCCGA GGCGTACGCC GACCTCGCCC GCCAGTACGC GACGTTCTGC
CGCGACCACG GCGACAACTC GCTGTACCGC ATCGCGGCCG GCGCCTCGAA CGGCGACTAC
GCGTGGACCG AGGCCCTCAT GAAGGCGATC AGCTGCCTCG GCTGCACGCG CGAGCCGCGC
GGCTTCTTCC AGGGCATCTC GTTCCACTAC TACACGGTGC CCGGGCCGTG GCACGACAAG
GGCAGCGCGC TCGAGTTCGA CACCGACGAC TACTACACGA CCATGGTCAA GGCACGCGGC
GTCGAGGAGA TCATCCGCGG ACACGCCGCC GTCATGGACG TGTACGACCC GGGCAAGACC
GTCGGCCTCG TGCTCGACGA GTGGGGCACG TGGTGGAACG TCGAGCCGGG CACGAACCCC
GGATTCCTGT ACCAGCAGAA CACGCTGCGC GACGCGCTCG TGGCGTCCGT GCACTTCGAC
GCGTTCCACC GCCACGCCGA CCGGCTGTTC ATGGCGAACA TCGCGCAGAC GGTGAACGTG
CTGCAGGCCA TGATCCTCAC GGACCCGGAG TCCGGCGCCC TCGTGCTCAC GCCGACGTAC
CACGTTTTCG AGATGAACAC CGGTCACCAC GACGCCGCCG CGCTGGACGT GCACCTGACG
GGCGCCGGCA CGAAGGCGGT CGGCGACGGC GAGCTCGAGC TGATCTCGGC CTCCGCGTCC
GTCAAGGGCG ACACGGCGCT CGTCTCGCTC ACGAATCTGG ACGCCGACGG CGCCGCGTCC
GTCGTGCTGG ATCTGCGCGG CCGATCGGTG GTCGCCTCCC GCGGCCGGAT CCTCACCGCC
GACTCGCTGC AGACGCACAA CACGCCCGAC GCGGCCGCCG TCGCGCCGTC GTCCTTCGAC
GCCGTCTCCG TGACGGACGA CGCGTTCGGT CACGGCCTGG CCGTGGAGAT CCCGGCGCAC
TCGTACGTGA CGCTCGAGCT CGACCTCGCC TGA
 
Protein sequence
MTTTARAVID LDVPGPTISR HLYGHFAEHL GRCIYGGFWV GEDSDVPNEG GIRLDVVEAL 
RALQIPNLRW PGGCFADEYH WRDGIGPRSE RPRMVNTHWG DVVEDNSFGT HEFMALCELL
GTEPYVNGNV GSGTVREMSE WVEYLTRPGT SPMADLRRAN GRDEPWKVPF WGIGNEAWGC
GGNMRAEAYA DLARQYATFC RDHGDNSLYR IAAGASNGDY AWTEALMKAI SCLGCTREPR
GFFQGISFHY YTVPGPWHDK GSALEFDTDD YYTTMVKARG VEEIIRGHAA VMDVYDPGKT
VGLVLDEWGT WWNVEPGTNP GFLYQQNTLR DALVASVHFD AFHRHADRLF MANIAQTVNV
LQAMILTDPE SGALVLTPTY HVFEMNTGHH DAAALDVHLT GAGTKAVGDG ELELISASAS
VKGDTALVSL TNLDADGAAS VVLDLRGRSV VASRGRILTA DSLQTHNTPD AAAVAPSSFD
AVSVTDDAFG HGLAVEIPAH SYVTLELDLA