Gene Bcav_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0053 
Symbol 
ID7858256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp54916 
End bp56190 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content74% 
IMG OID643864131 
Productputative alpha-galactosidase 
Protein accessionYP_002880081 
Protein GI229818555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.961191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGA ACAGCTGGGA CTGCTACGGC ACGACCGTCA CGGAGGCCGA GGTCGTCGCG 
AACGCCGAGT TCATGGCCAC CCACCTGCGC GCGCACGGCT GGGACACCGT CGTCGTCGAC
ATCGCCTGGT ACGACCCCAC CGCGAAGGCC CACGGCTACA ACGACGACGC CCCGCTCGAG
CTGGACGCCC ACGGCCGCCA GCTCCCCGCC CCGAACCGTT TCCCGAGCGC CGCCGACGGC
GCCGGCTTCG GCCCGCTCGC GGCAAAGGTC CACGAGCTCG GACTCCGCTT CGGGCTGCAC
GTCATGCGCG GGATCCCGCG GCTCGCCGTC GATCGCGACC TGCCGATCGC CGGCACCGGG
TGGACGGCCC GCGACGCCGC CGACACCAGC TCGATCTGCC CCTGGAACCC GGACAACTAC
GGCCTCGATC ACACGCATCC CGCCGCGCAG GCGTACTACG ACGCGCAGGT CGCCCAGTTC
GCCGCGTGGG GCGTCGACTT CGTCAAGGCC GACGACATGC TCTGGCCCTA CCACCACGCG
GAGATCGAGG CCTACGCCCG GGCGATCGAG CGGTCCGGCC GACCCATGGA GCTGAGCCTC
TCCCCCGGCC GAGACATCTC GCTCGCGCAC CTGGACCACC TGCGCGCGAG CTCGGCGATG
TGGCGCGTCA GCGACGACCT CTGGGACCGC TGGGACGACG TCGAGGCCCA GTTCGCGCGC
ATGGCGCGTT GGGCGCCGCA CCAGTCGCCC GAGGGCTGGG CCGACGCCGA CATGCTCCCC
CTCGGCCGGA TCGGCATCCG CGCCGAGCGC GGCGACGACC GCCACTCGCG CCTCACCCCG
GCCGAGCAGG TCACGCTCCT CAGCCTGTGG GTGATCTCCC GCTCGCCGCT CATGATGGGC
GGCGACCTGC CGACGTCGTC CCCCGAGACC ATCGCCCTCC TCACCAACGA CGCCGTCCTC
GACGTCCTGC GCACCTCGCG CGCGAGCCGC GAGGTGCTGC GCGAGGGCGA CCTCGTGCTG
TGGACGGCCG AGGGGGCCGA CGACGGCGGC ACGCGCCTCG TGCCGTCGGG TGCGCCGGTG
CGCTACGCGG CTGTGTTCCA CCTCGGCGAC GAGCCGACCC GCGTGAGGCT CGCCCTCGGC
GACGTCGGCG GACTCCCGAC GGACGCCGTC GTCGACGTCT GGTCCGGCGA GCAGGTGCCC
ACGGTCGCCG GCGCGCTCGA GCTCGACCTC CCGGCCCACG GCGCGCACCT GCTCCGCCTC
TCGCCGCGGA GCTGA
 
Protein sequence
MGWNSWDCYG TTVTEAEVVA NAEFMATHLR AHGWDTVVVD IAWYDPTAKA HGYNDDAPLE 
LDAHGRQLPA PNRFPSAADG AGFGPLAAKV HELGLRFGLH VMRGIPRLAV DRDLPIAGTG
WTARDAADTS SICPWNPDNY GLDHTHPAAQ AYYDAQVAQF AAWGVDFVKA DDMLWPYHHA
EIEAYARAIE RSGRPMELSL SPGRDISLAH LDHLRASSAM WRVSDDLWDR WDDVEAQFAR
MARWAPHQSP EGWADADMLP LGRIGIRAER GDDRHSRLTP AEQVTLLSLW VISRSPLMMG
GDLPTSSPET IALLTNDAVL DVLRTSRASR EVLREGDLVL WTAEGADDGG TRLVPSGAPV
RYAAVFHLGD EPTRVRLALG DVGGLPTDAV VDVWSGEQVP TVAGALELDL PAHGAHLLRL
SPRS