Gene Bcav_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0018 
Symbol 
ID7858220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp19117 
End bp19905 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID643864095 
Productmucin-associated surface protein (MASP) 
Protein accessionYP_002880046 
Protein GI229818520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA AGAAGAAGCA CGTCGACCCG GAGCAGATCA AGGAGCAGGC CACCGAGGCC 
GGCAAGTCGG CGCTGCACCT CGCGGAGCAG GGCAAGGACT GGGCCACGCC GCGCGTCGAG
GCCGCCATCG ACTGGGCTGC TCCGCGGATC GAGAAGGCGT GGCGGGCAGG TGTCCTCGCC
GCGGCCCCGA AGGTCGAGCA GGCCGCCGAG AAGGCGAAGG ACGCCACCGA CTCCGCGCAC
GACACGCTCG TCGACGTCGT CATCCCGAAG ATCGTCGCGG CGATGCAGGA GGCCGCCGAC
GCCGCCGCCG CCGGGGCGAA CGGCGCCGCT GACAAGGCCA AGGCCGCGAC GGCGGCCGTC
GTCGAGTTCG TCGAGCCCCC GAAGAAGAGC CACGTCGGCC GCACCATCGG CTGGATCGCC
GTCGGTGGCG CCGTCGCCGT CGCCGGCTAC GCCGTCTGGC GCCGCACGCA GCCGCTCGAC
GACCCGTGGG CCGAGGAGTA CTGGGAGGAC GCGGCCGGCG ACGACGCGCA GGCAGCTGTC
GACGACGCGT TCGCCAGCGG CACGTCCACC GTCACCGACG CGGCCGCCGA GACCACCGGG
GCCGCGAAGG ACAAGGTCGA GGACGCGGCC GACGCCGTCG CCGACACCGC GAAGGATGCC
GCCGACACCG CTGCCGAGAA GGTCGACGCC GCGGCCGGTG AGGTCGAGGA CGTCGTGGCC
GAGGCCAAGG ACGCCGCCGC GAAGCCCACG CGTCGGCGCA CCACGAAGAA GGCTGACGAC
GCCGGCTGA
 
Protein sequence
MSRKKKHVDP EQIKEQATEA GKSALHLAEQ GKDWATPRVE AAIDWAAPRI EKAWRAGVLA 
AAPKVEQAAE KAKDATDSAH DTLVDVVIPK IVAAMQEAAD AAAAGANGAA DKAKAATAAV
VEFVEPPKKS HVGRTIGWIA VGGAVAVAGY AVWRRTQPLD DPWAEEYWED AAGDDAQAAV
DDAFASGTST VTDAAAETTG AAKDKVEDAA DAVADTAKDA ADTAAEKVDA AAGEVEDVVA
EAKDAAAKPT RRRTTKKADD AG