Gene Bcav_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0005 
Symbol 
ID7858205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp5612 
End bp6133 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content78% 
IMG OID643864080 
Productprotein of unknown function DUF721 
Protein accessionYP_002880033 
Protein GI229818507 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGTG AGGGAGAGGA CGCCGCTCCC GACGACGGCG TGGAGGCGGC AGCGGCGGCT 
CTCGGCCGCG CGCGCCGGGC GGCCGAGGAG CGCGGCATCC GTCCCGGGAC CCGGCCCCGG
CCGAGGCGTG GCGGGGCGAG CCTCCCGGGT GCGACGTCCC GCGATGCCCG CGACCCCGAG
CTCGTCGCCT CGACGCTGGG ACGGGTCCTC GCGGAGCGCG GCTGGACGGC GTCGCTCTCC
GTCGGCTCGG TGGTCGGCCG CTGGCGCGAG GTCGTCGGTG ACCAGATCGC CGACCACTGC
GCACCGGAGA CGTTCGACGG CGGCCGGTTG GTCGTCCGGA CCACGTCGAC GGCGTGGGCC
ACGCAGCTCA AGCTGCTCCT GCCGCAGCTC GAGCGCCGCC TCGCGGCCGA GGTCGGTGAA
GGCGTGGTCG AGGAGATCAC GGTGCTCGGG CCGGGCGGAC CGTCGTGGCG CCGGGGGCCG
CGCTCCGTTC CGGGGCGAGG TCCGCGCGAC ACCTACGGGT AG
 
Protein sequence
MSGEGEDAAP DDGVEAAAAA LGRARRAAEE RGIRPGTRPR PRRGGASLPG ATSRDARDPE 
LVASTLGRVL AERGWTASLS VGSVVGRWRE VVGDQIADHC APETFDGGRL VVRTTSTAWA
TQLKLLLPQL ERRLAAEVGE GVVEEITVLG PGGPSWRRGP RSVPGRGPRD TYG