| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0001 |
|---|
| Symbol | |
|---|
| ID | 7858580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 322 |
|---|
| End bp | 1791 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643864076 |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_002880029 |
|---|
| Protein GI | 229818503 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCGG CCGACTCCTC CAACGGCGAC GTCCCTGGTG AGGACTCCCT CGAGGGCAAC
TGGGCCCGTA CGGTCACCGT GCTCGGAGAG TCCGGCTCGC TCGGCGCGCC GCAGCTGGCG
TTCGTCCGGC TGACCCGGCC TCTGGGGCTC ATCGACGAGA CGCTTCTCCT CGCCGTGCCG
AGCGATTTCG CGAAGGAGTT CCTCGAGACC CGGGCACGCG AACAGATCAT GCGGGCGCTC
GCGGCGTCGT TCGGCCGCAC GCTCCGCTTC GCCGTGACCG TCGATCCGAG CCTGCAGGAC
GCCGTCCCGG CCGAGTCGAG CGCCGAGGAG ATGCGCGACG CCGAGGCCGC CGCTCCGGAG
CCGATCGAGC GCTCCGCCCG CGCGCAGCAA CGCGCCGACG CGCTGGCGTC GCAGGCCCGC
ACCGCCGGAT CGGACGGCGC CCGGCTCAAC GCCACCTACA CGTTCGACAC GTTCGTCATC
GGCTCGAGCA ACCGGTTCGC GCATGCCGCC GCGACCGCCG TCGCCGAGGC CCCGGCGAAG
GCCTACAACC CGCTGTTCAT CTACGGGGAC TCCGGCCTCG GCAAGACGCA CCTCCTGCAC
GCGATCGGCC ACTACGCGCA GCGCCTCTAC CCGGGGATCG CCGTCCGCTA CGTGAACTCG
GAGGAGTTCA CCAACGACTT CATCAACTCG ATCCGCGACG ACAAGGCCGA GGCGTTCCAG
CGCCGGTACC GCAGCGTCGA GGTCCTCCTG GTCGACGACA TCCAGTTCCT GCAGGGCAAG
GAACAGACGA TGGAGGAGTT CTTCCACACG TTCAACACCC TGCACAACGC GAACAAGCAG
GTCGTCATCA CGTCCGATGT CGCACCGAAG TACCTCGAGG GCTTCGCCGA CCGCATGCGC
TCGAGGTTCG AGTGGGGCCT CATCACCGAC ATCCAGCCGC CCGACCTCGA GACGCGGATC
GCGATCCTGC GCAAGAAGGC CGGCAGCGAG CGACTCTCCG CCCCCGACGA CGTGCTCGAG
TACATCGCGT CCCGCATCTC GACGAACATC CGCGAGCTCG AGGGCGCGCT CATCCGCGTG
ACGGCGTTCG CGAACCTCAA CGAGCAACAG GTCGATCTCG CGCTCGCCGA GATGGTGCTG
AAGGACCTCA TCACCGACGA CGACACGACC GAGATCACGC CGGCCGTCAT CATGGCGCAG
ACGGCGAACT ACTTCGGGGT CTCGATCGAC GCGCTGTGCA GCGCCGACCG CACCCGCGTG
CTCGTCAACG CCCGCCAGAT CGCCATGTAC CTGTGCCGCG AGCTCACGGA CCTCTCGCTC
CCGAAGATCG GGCAGATCTT CGGCGGCCGC GACCACACCA CGGTCATGCA CGCGAACCGG
AAGATCCGCG AGCTCATGGC GAAGCAGCGC TCGACGTTCA ACCAGGTCAC CGAGCTCACG
AACCGCATCA AGCAGCAGAA CCGCGCCTGA
|
|---|
| Protein sequence | MAAADSSNGD VPGEDSLEGN WARTVTVLGE SGSLGAPQLA FVRLTRPLGL IDETLLLAVP
SDFAKEFLET RAREQIMRAL AASFGRTLRF AVTVDPSLQD AVPAESSAEE MRDAEAAAPE
PIERSARAQQ RADALASQAR TAGSDGARLN ATYTFDTFVI GSSNRFAHAA ATAVAEAPAK
AYNPLFIYGD SGLGKTHLLH AIGHYAQRLY PGIAVRYVNS EEFTNDFINS IRDDKAEAFQ
RRYRSVEVLL VDDIQFLQGK EQTMEEFFHT FNTLHNANKQ VVITSDVAPK YLEGFADRMR
SRFEWGLITD IQPPDLETRI AILRKKAGSE RLSAPDDVLE YIASRISTNI RELEGALIRV
TAFANLNEQQ VDLALAEMVL KDLITDDDTT EITPAVIMAQ TANYFGVSID ALCSADRTRV
LVNARQIAMY LCRELTDLSL PKIGQIFGGR DHTTVMHANR KIRELMAKQR STFNQVTELT
NRIKQQNRA
|
|---|
| |