| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_52440 |
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| Symbol | trmE |
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| ID | 7764078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5360937 |
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| End bp | 5362304 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643808055 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002802289 |
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| Protein GI | 226947216 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGCG CACGCGAAAC CATCGCCGCC ATCGCCACCG CCCAGGGGCG CGGCGGGGTC
GGCATCGTGC GGGTCTCGGG TCCCCTGGCC GGGACGATCG CCACGGGCAT CTGCGCGCGT
CCGTTACGGC CGCGGCACGC CCACTACGGT GCCTTCCGCG ACGGCACGGG CCAGGTCCTC
GACGAAGGCA TCGCATTGTT CTTCCCCGGC CCCCATTCCT TCACCGGCGA GGACGTGCTC
GAACTGCAGG GGCATGGCGG CCCGCTGGTG CTCGATCTGC TGCTGCGCCG CTGCCTGGAA
CTGGGCGCGC GGATGGCCCG GCCAGGCGAA TTCAGCGAGC AGGCCTTCCT CAACGACAAG
CTGGACCTAG CCCAGGCCGA GGCGATCGCC GATCTGATCG AGGCCAGTTC GGCACAGGCG
GCGCGCAATG CCCTGCGCTC GCTGCAGGGC GAGTTTTCCC GGCGCGTGAA TGCGCTCGGC
GAGCGGCTGA TCGAGCTGCG CCTCTACGTC GAGGCCGCCA TCGACTTTCC CGAGGAGGAA
ATCGACTTCC TCGCCGACGG TCGCGTGCTC GAACTGCTCG ACGGTCTGCG CGCCGACTTG
TCCACAGTGC TGCGCGAAGC GGGGCAGGGC GCGCTCCTGC GCGACGGCAT GACGGTGGTC
ATCGCCGGCC GGCCGAACGC CGGCAAGTCC AGCCTGCTCA ACGCCCTGGC CGGACGCGAG
TCAGCGATCG TCACCGACAT CGCCGGCACC ACCCGGGATC TGTTGCGCGA ACATATCCAC
ATCGACGGCA TGCCGCTGCA TATCGTGGAT ACCGCCGGCC TGCGCGATAC CGAGGATCGG
GTCGAACGGA TCGGCGTCGA ACGCGCGCTC CAGGCCATCC GCGAAGCCGA CCGGGTGCTG
CTGGTGATCG ACGCCAGCGC CCCGGAAGCG GCCGATCCCT TCGCCCTATG GCCGGAATTC
CTCGACCTGC CTCCCGAACC GGGCAAGGTC ACCCTGATCC GCAACAAGAT CGACCTGACT
GGCGAGCCGA TCGTCCACGA ACAGGGCAGC GACGGCCACG TCGTCATCGG CCTGTCGGCC
CGCACCGGCG AAGGCCTGGA TCTGCTGCGC AAGCACCTGA AAGCCTGCAT GGGTTTCGAA
CAGACCATCG AGAGCAGCTT CAGCGCCCGC TGTCGCCACC TGGAAGCCCT GCGCCGGGCC
GCCAACAGCC TCGAGCACGG ACATGCCCAA CTCATCGGCT GCGGGGCCGG CGAACTGCTC
GCCGAAGACC TGCGCCAGGC CCAGCAGCAT CTGGGGGAGA TCACCGGGGC CTTCACTTCG
GACGATCTGC TAGGGCGGAT CTTTTCGAGT TTTTGCATCG GGAAGTGA
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| Protein sequence | MHSARETIAA IATAQGRGGV GIVRVSGPLA GTIATGICAR PLRPRHAHYG AFRDGTGQVL
DEGIALFFPG PHSFTGEDVL ELQGHGGPLV LDLLLRRCLE LGARMARPGE FSEQAFLNDK
LDLAQAEAIA DLIEASSAQA ARNALRSLQG EFSRRVNALG ERLIELRLYV EAAIDFPEEE
IDFLADGRVL ELLDGLRADL STVLREAGQG ALLRDGMTVV IAGRPNAGKS SLLNALAGRE
SAIVTDIAGT TRDLLREHIH IDGMPLHIVD TAGLRDTEDR VERIGVERAL QAIREADRVL
LVIDASAPEA ADPFALWPEF LDLPPEPGKV TLIRNKIDLT GEPIVHEQGS DGHVVIGLSA
RTGEGLDLLR KHLKACMGFE QTIESSFSAR CRHLEALRRA ANSLEHGHAQ LIGCGAGELL
AEDLRQAQQH LGEITGAFTS DDLLGRIFSS FCIGK
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