Gene Avin_52270 details

Gene Information

• Locus tag: Avin_52270
• Symbol: gidA
• ID: 7764064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 5338707
• End bp: 5340602
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643808043
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002802277
• Protein GI: 226947204
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGGACT TCCCTTCCCG TTTTGACGTG ATCGTGATCG GCGGCGGCCA TGCCGGTACC 
GAAGCCGCGC TCGCGGCTGC GCGCATGGGC GTGAAGACCC TGCTGCTCTC CCACAATGTG 
GAAACCCTCG GGCACATGAG CTGCAACCCG GCCATCGGAG GTATCGGCAA GAGCCATCTG 
GTCAAGGAGA TCGATGCGCT CGGCGGGGCC ATGGCCCGGG CCACCGACGT GGCCGGCATC 
CAGTTCCGCG TGCTCAACAG TCGCAAGGGA CCGGCGGTGC GCGCTACGCG CGCCCAGGCC 
GACCGCGCCC TGTACAAGGC GGAGATCCGC CGCATCCTGG AAAACCAGCC GAACCTGTGG 
ATCTTCCAGC AGTCCGCCGA CGACCTGATC GTCGAGGGCG AGCAGGTGCG CGGCGTGGTC 
ACCCAGATGG GACTGAAATT CCGCGCCGAC AACGTGGTGC TCACCGCCGG TACCTTCCTC 
GGCGGACTTA TCCACATCGG TCTGGAAAAC TATTCGGGCG GCCGCGCCGG CGATCCGCCA 
TCGCAGGCGC TGGCCCGCCG CCTGCGCGAG CTGCCGCTGC GTGTCGGGCG GCTGAAGACC 
GGCACGCCGC CACGCATCGA CGGCCGTTCC ATCGATTTCT CGGCGATGAC CGAACAACCG 
GGCGACACGC CCGTGCCGGT GATGTCCTTC CTCGGTTCGC GCGAGCAGCA TCCGCGGCAG 
GTCAGTTGCT GGATCACCCA CACCAATGCG CGCACTCACC AGATCATTGC CGCCAACCTG 
GACCGCTCGC CGATGTATTC GGGCGTGATC GAGGGCATCG GCCCGCGTTA CTGCCCGTCG 
ATCGAGGACA AGATCCACCG CTTCGCCGAC AAGGACAGCC ACCAGGTGTT TCTGGAGCCG 
GAAGGCCTGT CGACCCATGA GGTCTATCCG AACGGCATCT CCACCTCGCT GCCGTTCGAC 
GTGCAGCTCG AGATCGTCCG TTCCATCCGT GGTCTGGAGA ACGCCCATAT CGTCCGTCCG 
GGCTACGCCA TCGAGTACGA CTTCTTCGAT CCGCGCGATC TCAAGTACTC GCTGGAAACC 
AAGGTGATCG GCGGTCTGTT CTTCGCCGGG CAGATCAATG GCACCACCGG CTATGAAGAA 
GCCGGCGCCC AGGGGCTGCT CGCCGGCGCC AACGCCGCGC TGCGCGCCCA GGGCCGCGAA 
GCCTGGTGTC CGCGCCGCGA CGAGGCCTAC CTCGGCGTAC TGGTCGACGA CCTGATCACC 
CTCGGTACCC AGGAGCCGTA CCGCATGTTC ACCTCGCGCG CCGAATACCG GCTGATCCTG 
CGCGAGGACA ACGCCGACCT GCGCCTGACC GAGCAGGGCC GTGAGCTGGG CCTGGTCGAC 
GACGCCCGCT GGGCGGCGTT CTGCGCCAAG CGCGAGGGTA TCGAGCGCGA GGAACAGCGT 
CTGAAGACCA CCTGGGTGCG CCCCGGCACG CCGCAGGGCA AGGCGGTCGC CGCGCGTTTC 
GGCAGTCCGC TGGCCCGCGA GTACAACCTG CTCAACCTGC TGGCCCGGCC GGAAGTCGAT 
TACGCCAGCC TGGTCGAGTT GACCGGTGGC GGCGCCGAGG ACGAGCAGGT CGCCGAGCAG 
GTGGAGATCA AGACCAAGTA CGCAGGCTAC ATCGACCGCC AGCAGGACGA GATCGCTCGC 
CTGCGTGCCA GCGAAAGCGT CCGTCTGCCG GAGAATCTGG ACTATGCGTC GATTTCCGGA 
CTGTCCAAGG AGATCCAGCA CAAGCTCGGT CAGGGCCGCC CGCAGACGCT CGGTCAGGCG 
TCGCGGATTC CGGGGGTCAC CCCGGCGGCG ATTTCCCTGC TGTTGATTCA TCTGAAGAAG 
CGCGATGCCG GCCGCAACCT GGAGCAGAGC GCCTGA 

 

Protein sequence

MVDFPSRFDV IVIGGGHAGT EAALAAARMG VKTLLLSHNV ETLGHMSCNP AIGGIGKSHL 
VKEIDALGGA MARATDVAGI QFRVLNSRKG PAVRATRAQA DRALYKAEIR RILENQPNLW 
IFQQSADDLI VEGEQVRGVV TQMGLKFRAD NVVLTAGTFL GGLIHIGLEN YSGGRAGDPP 
SQALARRLRE LPLRVGRLKT GTPPRIDGRS IDFSAMTEQP GDTPVPVMSF LGSREQHPRQ 
VSCWITHTNA RTHQIIAANL DRSPMYSGVI EGIGPRYCPS IEDKIHRFAD KDSHQVFLEP 
EGLSTHEVYP NGISTSLPFD VQLEIVRSIR GLENAHIVRP GYAIEYDFFD PRDLKYSLET 
KVIGGLFFAG QINGTTGYEE AGAQGLLAGA NAALRAQGRE AWCPRRDEAY LGVLVDDLIT 
LGTQEPYRMF TSRAEYRLIL REDNADLRLT EQGRELGLVD DARWAAFCAK REGIEREEQR 
LKTTWVRPGT PQGKAVAARF GSPLAREYNL LNLLARPEVD YASLVELTGG GAEDEQVAEQ 
VEIKTKYAGY IDRQQDEIAR LRASESVRLP ENLDYASISG LSKEIQHKLG QGRPQTLGQA 
SRIPGVTPAA ISLLLIHLKK RDAGRNLEQS A