Gene Avin_52240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_52240 
SymbolparB 
ID7764061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5336359 
End bp5337243 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID643808040 
Productchromosome partition ParB 
Protein accessionYP_002802274 
Protein GI226947201 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCA AGAAACGAGG CCTGGGTCGC GGGCTGGATG CCCTGCTGGG CGGTACCGGT 
GGCGGCGTGG CCACCCTGCA GAAGGAAATC GAGCAGCAGC AGGTCGATGG CCATGAACTG
CAGCATCTGC CGCTGGAGTC GATCCAGCGC GGCAAGTACC AGCCGCGCCG CGACATGGAC
CCGGTGGCTC TGGAGGAACT GGCGCAATCG ATCCAGGCGC AAGGGGTGAT GCAGCCGATC
GTGGTGCGGC CGCTCGATGG CCAGCGCTAC GAGATCATCG CCGGCGAACG GCGCTGGCGG
GCCAGCCAGC AGGCCGGTCT GAAGAAGATT CCGGCCATCG TCCGCGACGT GCCGGACGAG
GCCGCCATCG CCATGGCGCT GATCGAGAAC ATCCAGCGCG AGAACCTCAA TCCGCTCGAG
GAAGCCCTCG CCCTGCAGCG CCTGCAGCAG GAGTTCCAAC TGACCCAGCA GCAGGTCGCC
GATGCGGTGG GCAAGTCGCG GGTCAGCGTC AGCAATCTGC TGCGGCTGAT TTCCCTGCCG
GAGGAGATCA AGACCCTGCT GGCACATGGC GATCTGGAAA TGGGCCACGC CCGTGCGTTG
CTCGGCCTTC CCGCCGAACG GCAGGTGGAA GGCGCGCGTC ATGTTGTCGC ACACGGATTG
ACGGTCCGGC AAACCGAGGC GCTGGTGCGC CAGTGGCTGA ACGAGCAACC GCAGGCGGAG
AAAACCCCTA CGGTCGATCC GGACATAACC CGTCTGGAAC AGCGGCTGGC GGAGCGTTTG
GGCTCACCGG TGCAGATCAG GCACAGCCAG AAAGGCAAGG GCCAACTTGT GATCCGCTAC
AACTCGCTGG ACGAACTTCA GGGGGTTCTG GCCCACATCC GCTGA
 
Protein sequence
MAIKKRGLGR GLDALLGGTG GGVATLQKEI EQQQVDGHEL QHLPLESIQR GKYQPRRDMD 
PVALEELAQS IQAQGVMQPI VVRPLDGQRY EIIAGERRWR ASQQAGLKKI PAIVRDVPDE
AAIAMALIEN IQRENLNPLE EALALQRLQQ EFQLTQQQVA DAVGKSRVSV SNLLRLISLP
EEIKTLLAHG DLEMGHARAL LGLPAERQVE GARHVVAHGL TVRQTEALVR QWLNEQPQAE
KTPTVDPDIT RLEQRLAERL GSPVQIRHSQ KGKGQLVIRY NSLDELQGVL AHIR