Gene Avin_52150 details

Gene Information

• Locus tag: Avin_52150
• Symbol: atpC
• ID: 7764052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 5329203
• End bp: 5329625
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643808031
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002802265
• Protein GI: 226947192
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.205122
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTCC ATTGCGATAT CGTCAGCGCG GAAGAAGAGC TGTTCTCGGG CCTGGTGGAA 
ATGGTCATCG CCCATGCCAA CATGGGCGAC GTCGGTATCC TGCCGGGCCA CATGCCGCTG 
CTGACCGATC TCAAGCCCGG TCCGGTGCGG GTGATCAAGC AGGGTGGCGA CGAGGAAATC 
TTCTACATCT CCGGCGGCTT CCTCGAAGTG CAGCCGAGCA TGGTGAAGGT GCTCGCCGAC 
ACTGCGACCC GCGCCAAGGA TCTGGACGAG GTCGCCGCCC AGGAAGCCGT CAAGGCCGCC 
CAGAAGGCGC TCAGCGAGAA GGGCGCGGAG TTCGACTACA GCTCCGCCGC CGCCCGTCTG 
GCGGAGGCTG CCGCCCAGTT GCGCACCATC AACGAGCTGC GCAAGAAGTA CGGCCGCCAC 
TGA 

 

Protein sequence

MSVHCDIVSA EEELFSGLVE MVIAHANMGD VGILPGHMPL LTDLKPGPVR VIKQGGDEEI 
FYISGGFLEV QPSMVKVLAD TATRAKDLDE VAAQEAVKAA QKALSEKGAE FDYSSAAARL 
AEAAAQLRTI NELRKKYGRH