Gene Avin_52120 details

Gene Information

• Locus tag: Avin_52120
• ID: 7764049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 5324279
• End bp: 5326285
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643808028
• Product: TonB-dependent receptor
• Protein accession: YP_002802262
• Protein GI: 226947189
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.618776
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCACC CCGCATCTCG CCTGCCCCTT TTGGCGGGCG GCCTCTGTCT TTGCCTGAAC 
GGTCTGTCCC AGGCCGATGA CAATGTCTTC GAACTCGGCC AGATCTTCGT GCTGGGCAGC 
CATGGCGACG CCAGCCGCCT CGACAACACG GACTCGGTGG ACAGCCGGGA CATGCGCCTG 
CACGACCGCG AAACCGTCGG CGAGGCGCTC AACCTGATTC CCGGGGTCAG TCTCAGCAAG 
ACCGGCGCTC GCAACGAGCA GATGGTCTAC GTGCGTGGCT TCGATCTGCG CCAGGTGCCC 
GTCTTCATCG ACGGCATCCC GGTGTACGTG CCCTACGACG GCTATCCCGA TCTCGGCCGC 
TTCACCACCT TCGAACTATC CAGGATCGAG GTCTCCAAGG GCTTCAGCTC CATGACCTAC 
GGCCCGAACA CCCTGGGCGG GGCGATCAAC CTGGTGACCC GGCGGCCGCA GGAGGAATTC 
GAAGGCGAGA TCGGCACCGG TTTCAGCTTC ACCGACCGAG CGGAGAACAA CGGCGAATGG 
ACATACGCCA ACTTCGGCAC CCGGCAGGAC AACTGGTGGG CGCAGATGGG TCTGTCCTAC 
CTCAACGAGG ATTATTTCCG CCTGCCCGGC AACTTTGACG ACGAACGCCT GGAGGATGGC 
GGGCGGCGCG GCAACAGCGA CCGCAAGGAC AAGAAGATCA ACTTCAAGGT CGGCTTCACG 
CCCAACGACA CCGACGAATA CGTGCTGGGC TACGTCAAGC AGGACGGCGA AAAGGGCAAC 
CCCGCCTACG CCGGACACCT GGGCGGCAGC TACAACCGCT TCTGGCGCTG GCCCAAGTGG 
GACAAGACCA GCTACTACAT CAACACGGTC ACCGCTTTCG GCGATCACAA GGTCAAGGCC 
CGCCTCTACC ACGACATCTA CAAGAACGAC CTGTACTCCT ACGACAACGA CAGCTACAGC 
ACGCAGAAAA CCTCCCGGGC GTTTCGCAGC TACTACGACG ACTACAGCAC CGGTCTCAGC 
CTCGAGGACG AGTGGACCCT GGACGAAAAC AACCAGTTGC GCCTGGCCTT CCACCACAAG 
CAGGACGTAC ACCGCGAGCA CGACGCCGGC GAGCCCAAGC AGCGTTTCGA GGACGAAACC 
CAGTCCCTCG CCCTGGAGTA CACCCGCAAG CTGACCGAAC GTCTCACCCT GATCGCGGGT 
TTCTCCCATG ACCGGCGCAA CGGCCGCGAA GCCGAGACCT ACACCAGCGC CGCCGGCCTG 
TTCGAGGAGG AAGGCGGGCG CGAATCCACC AACAACGGCC AGCTCGGGCT GTTCTTCCAG 
GCCGACCCGC GGACCCTGTG GCGCTTCACC GTGGCGCGCA AGAGCCGCTT CCCGACCATG 
AAGGATCGCT ACTCCTACCG TTTCGGCAGC GCCCTGCCCA ACCCCGACCT GAAAACCGAG 
GAAGCCACCC ATTTCGAGAT CGGCTACAAG CGTGCCCTGA GCGACAGCCT GGAACTGGAT 
CTGGCGCTGT TCCGCAGCCA CGTGGACGAC CTGCTGCAAT CGGTGCGCGT GGCCGGCAGC 
GCCTGCTCCA ACCCGCCCTG CTCGCAGATG CAGAATGTCA GCGAGGCGCG CATGAACGGC 
GTGGAAGCCT CGCTGAACGG CAACCTGGGC GCCTGGGAAG TGAACTTCAA CTACCTCTAC 
CTCAACCGCC AGAACCGCTC CTCCGACGAC TCCATACGGC TCACCGACAC GCCCAAGCAC 
AAGGGCTTCC TCAGTATCGG CCGGTGGTTC GGCCCATGGC ACCTGATGGC CAGCTCGGAC 
GCTTCCTCCA GCCGCTACAG CTCCACCGAC GGCACCCAGG AAGCTTCCGG ATTCGTGGTC 
TTCAACCTGA AGGGCGGCTA TCGCTTCGAC AACGGCCTGC AACTGGACGC CAGCGTGCAG 
AACCTCACCG ACCACGAGTA CGAATACAGC GAAGGCTATC CCGAACCGGG CCGCACCTTC 
GTCGTGCAGG CCAACCTGAC TTTCTGA 

 

Protein sequence

MQHPASRLPL LAGGLCLCLN GLSQADDNVF ELGQIFVLGS HGDASRLDNT DSVDSRDMRL 
HDRETVGEAL NLIPGVSLSK TGARNEQMVY VRGFDLRQVP VFIDGIPVYV PYDGYPDLGR 
FTTFELSRIE VSKGFSSMTY GPNTLGGAIN LVTRRPQEEF EGEIGTGFSF TDRAENNGEW 
TYANFGTRQD NWWAQMGLSY LNEDYFRLPG NFDDERLEDG GRRGNSDRKD KKINFKVGFT 
PNDTDEYVLG YVKQDGEKGN PAYAGHLGGS YNRFWRWPKW DKTSYYINTV TAFGDHKVKA 
RLYHDIYKND LYSYDNDSYS TQKTSRAFRS YYDDYSTGLS LEDEWTLDEN NQLRLAFHHK 
QDVHREHDAG EPKQRFEDET QSLALEYTRK LTERLTLIAG FSHDRRNGRE AETYTSAAGL 
FEEEGGREST NNGQLGLFFQ ADPRTLWRFT VARKSRFPTM KDRYSYRFGS ALPNPDLKTE 
EATHFEIGYK RALSDSLELD LALFRSHVDD LLQSVRVAGS ACSNPPCSQM QNVSEARMNG 
VEASLNGNLG AWEVNFNYLY LNRQNRSSDD SIRLTDTPKH KGFLSIGRWF GPWHLMASSD 
ASSSRYSSTD GTQEASGFVV FNLKGGYRFD NGLQLDASVQ NLTDHEYEYS EGYPEPGRTF 
VVQANLTF