| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51910 |
|---|
| Symbol | |
|---|
| ID | 7764028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5292043 |
|---|
| End bp | 5294907 |
|---|
| Gene Length | 2865 bp |
|---|
| Protein Length | 954 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643808007 |
|---|
| Product | Ankyrin |
|---|
| Protein accession | YP_002802241 |
|---|
| Protein GI | 226947168 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTGC TGACCTACGC CGGGCTCGAA CCCGGCCGGC TGAAGACCGC CCTGAACAAG
GCCATGGCCG CCATCGGGCG CGACGACTGG CGCAGCGTCG ACCTGAAGAA GCTGGCGCCG
ACGCCCTATT TCCGCATCAA GCTCGACCAG GCCAGCCGGC TGCTGCTGAG CTTCGTCCGC
TACCGGGACG AGACCGTCTG CCTGGCCCTG GAGGTCATCC CCAACCACGC CTACGAGAAA
TCCCGCTTCC TGCGCGGCGC CAGGGTCGAC GAGGCGCTGA TCGAGGAAGC CGACGCGGCG
CAGGCCGAGG CCGCCGCCAC GCCGGTGCGC TACCTGCATC CGGGGCGCGG GGAATTCCAC
CTGCTGGACA AGGTGATCTC CTTCGACGAT GCCCAGGAAG TCATCTACCG CCTGCCGCCG
CCGGCGATCC TGGTGGGCTC GGCCGGTTCC GGCAAGACCG CCCTGACCCT GGAGAAGATG
CGCCAGGCCG AGGGCGAACT GCTCTACGTC ACCCAGTCGC CCTGGCTGGC GCGCAATGCC
CGCGAACTCT ACTTCGCCAA CGGCTACCGC AACGACGCCC AGGAGCCGCA GTTCCTCGCC
TACCGCGAAT TCCTCGAAAC CCTGAAGGTG CCGGAAGGCC GCGAGGTGAA CTTCCAGGCC
TTCAAGGCCT GGTTCGAGCG GCACCGCCAG CAGTACCGCT TCACCGACGC CCACCAGTGC
TTCGAGGAGT TCCGCGGGGT GATCGGCAGT CAGCCGGAAG GTGCGCTCGA CGAGGCCGCC
TACCTGGCCC TGGGCACCCG CCAGTCGATC TTCCCGGCCG AGCGGCGCGC CGCCGTCCAC
CAGTTGTTCC GGCGCTATCA GGCCTGGCTC GCCGACAGCG GCCTGTACGA CAGTAATCTG
GTCGCCCAGC GATGGCAGGC GCTGGCCGAG CCCACTTACG ACTTCGTCGT CGTCGACGAG
GTGCAGGACT TGACCAACGC CCAGTTGGCG TTGGTACTGA AAACCCTCAG GAAACCCGGC
CAGTTCCTGC TCTGCGGCGA CTCCAACCAG ATCGTGCACC CCAACTTCTT TTCCTGGAGC
GCAGTCAAGG GCCTGTTCTG GCGCGATCCC GAGCTGGCCG AGCGGCAGAC CCTCTCGGTA
CTGCGGGTCA ACTACCGCAA CGCCCGCGAA GTCACCCGGG TGGCCAACGA CCTGCTGAAG
ATCAAGCATG CCCGCTTCGG CTCCATCGAC CGCGAGAGCA ACCACCTGGT CGAGTCCGCC
TCCGACGAGA CGGGCGAGGT GCGCCTTTTG GCCGACAAGG ACGCGATCAA GCGCGACCTG
GACGCCAGAA CCCGCGCCTC CACCCTGTTC GCCGTTCTGG TGCTGCGCGA CGAGGACAAG
GCCGAGGCGA GGAAGCACTT CCGCACGCCC CTGGTGTTCT CGGTACACGA GGCCAAGGGG
CTGGAATACC CCAACATCAT TCTCTACCGC TTCGTCTCCG ACCAGCGCCA AGCCTATGCG
GAAATCTGCG AGGGGGTCAC CGCCGCCGAC CTGGACAAGG ACGAGCTGGA CTACCGCCGC
GCCCGCGACA AGCAGGACAA GTCGCTGGAG ATCTGGAAGT TCTACGTCAA CGCCCTGTAC
GTCGCGCTGA CCCGCGCGGT GGAGCGGCTC TACCTGATCG AGAGCGATCA CGGACATCCG
CTGCTGCAAC TGCTGGGCGT GCGGGGCGGC GAGGCCCGGC TGGAAATCGA ATCCAGCAAA
TCCAGCCGCG AGGACTGGGA GCGCGAGGCG CACCGCCTGG AGCAGCAGGG CAAGCAGGAA
CAGGCCGAGG CGATCCGCCG CGACATCCTC CGGACCCGCC AGGTGCCCTG GCCGGTGTGG
AACTGGGAAA CCGCCACGCC GATGATCGAG CGTGCCCGCG ATCCTCGGGA AGTCTCCAAC
AAGGTGCGTC AGCAACTGCT CGACTTCGCC CTCTGGCACC AGCAGGAGCG GCACATCGAG
TACCTGTCCG ATACGCTGCA CTGGAATCCC GCCGTGCAAC TGATCGCCAA CGCCCGCCAG
GGCTCGATCT GGCGCACCCG CGACAGCCTC GTCGAGCGCC AGCTCGGCGC CTACCACAAG
AAGAACTTCA AGGACATCCT CGTCCAGTGC GACCAGTACG GCGTCGACCA CCGCACGCCG
ATGGACGCCA CCCCGCTGAT GCTAGCCGCC CTGGCCGGCA ACCTGCCGCT GGCGGAGGCG
CTGCTCGAAC GCGGCGCCGA TCCCGAACAG CGCGACCTGT TCGGCCACAA CGCGCTGTCC
TATGCCCTCG GCCGCGCCGT CGAGGACGAG GAGTACGCCG CCGATCCCCT CGGCGCGCTC
TATGAGCGCC TGGCGACTCC GCTGGACCTG GAAGTGGAGG GACGGCTGAT CCGCCTGCAG
CCGCAGCAGG GCGAATACCT GCCGCTGCAA CTCATGCTGG CCGGTCTCAA GGTGCTCGGC
TCGCAACTGA CCCACAGTCA GGAGTACCCG ATCGGCCGGC GCTACGGCTT CTACGCCGAC
TACCTGATGC GCAACATCAC GCATTTCCCG GCTGGCGTGC TGCGTCCCGA GCGCAGGAAG
CGCACCTACT TCAACCAGGT TCTGGCCCGC GCCGAAATCG ACAGCGGCTA CCGTCCGGCG
CGCAAGCTCT GGCAGCGCGT GCGCAACGGT CACTACCTGC CCAGCCCGGA ACTGAAGCTG
CGCGTGCCCG ACGGCGACGG CCAGGGCCGC TGGCTGCCGC TGTACGAGCT GCTGGCCGGC
CGGCAGATCC TCGCCGGCAA TGCCTACCTG ATGGTGGGCG AGTCGCTGCG CTGGATAATG
AAGGACGACA GCGAGCACGA CCCGCTGGAT TTCGGCCTGC TATGA
|
|---|
| Protein sequence | MRVLTYAGLE PGRLKTALNK AMAAIGRDDW RSVDLKKLAP TPYFRIKLDQ ASRLLLSFVR
YRDETVCLAL EVIPNHAYEK SRFLRGARVD EALIEEADAA QAEAAATPVR YLHPGRGEFH
LLDKVISFDD AQEVIYRLPP PAILVGSAGS GKTALTLEKM RQAEGELLYV TQSPWLARNA
RELYFANGYR NDAQEPQFLA YREFLETLKV PEGREVNFQA FKAWFERHRQ QYRFTDAHQC
FEEFRGVIGS QPEGALDEAA YLALGTRQSI FPAERRAAVH QLFRRYQAWL ADSGLYDSNL
VAQRWQALAE PTYDFVVVDE VQDLTNAQLA LVLKTLRKPG QFLLCGDSNQ IVHPNFFSWS
AVKGLFWRDP ELAERQTLSV LRVNYRNARE VTRVANDLLK IKHARFGSID RESNHLVESA
SDETGEVRLL ADKDAIKRDL DARTRASTLF AVLVLRDEDK AEARKHFRTP LVFSVHEAKG
LEYPNIILYR FVSDQRQAYA EICEGVTAAD LDKDELDYRR ARDKQDKSLE IWKFYVNALY
VALTRAVERL YLIESDHGHP LLQLLGVRGG EARLEIESSK SSREDWEREA HRLEQQGKQE
QAEAIRRDIL RTRQVPWPVW NWETATPMIE RARDPREVSN KVRQQLLDFA LWHQQERHIE
YLSDTLHWNP AVQLIANARQ GSIWRTRDSL VERQLGAYHK KNFKDILVQC DQYGVDHRTP
MDATPLMLAA LAGNLPLAEA LLERGADPEQ RDLFGHNALS YALGRAVEDE EYAADPLGAL
YERLATPLDL EVEGRLIRLQ PQQGEYLPLQ LMLAGLKVLG SQLTHSQEYP IGRRYGFYAD
YLMRNITHFP AGVLRPERRK RTYFNQVLAR AEIDSGYRPA RKLWQRVRNG HYLPSPELKL
RVPDGDGQGR WLPLYELLAG RQILAGNAYL MVGESLRWIM KDDSEHDPLD FGLL
|
|---|
| |