Gene Avin_51850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_51850 
Symbol 
ID7764022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp5281471 
End bp5282031 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID643808001 
ProductTranscriptional regulatory protein, TetR family 
Protein accessionYP_002802235 
Protein GI226947162 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTGGC CCGCCACGCA GCGCGCAGCG ACTCGCCAGC GGATTTTGGA GAGCGCGGCG 
CGCCTGTTTG CCCTGGAGGG TTTCGAGCGG GTCAGCATCG AGGCGATCAC GCGGGAAGCC 
GGCCTGACGC GCGGCGCCTT CTATCATCAC TTCTCCTCCA AGACCGAACT GTATGGCGAG 
GCGATTCAGG TCGCGGCCCG CCAGGGCGGC CAACTGCTCG AGCAGGCGGG CGCCGGTGGC 
CTGCGGCGGC TGGTGGAGAG CTATCTGTGC ATGGAGCACC GCGACGGCGG CCGGATGTGC 
TGTCCGCTGG CCTTCCTGGC GACCGATGCC GCCCGGCAGG ATGCGGCGAT CCGTGGCAGC 
TATACCCGGA CGTTCGAAGC GTTCGTGGCC CGCCTGGAGG CCGGGATGCC GGCGACGGCG 
ACCGGCGCGC GGCTGCGCGC CCTGCAGGTC GCGGTGGGGA TGATCGGCGG ACTGGCCCTG 
GCCCGCGCGG TCGACGACGC CGAACTGGCC GAGGAAATCC TGGCGGCTTG CCAGACCGGC 
TGTCTGTCCC TGCTGGAGTA G
 
Protein sequence
MSWPATQRAA TRQRILESAA RLFALEGFER VSIEAITREA GLTRGAFYHH FSSKTELYGE 
AIQVAARQGG QLLEQAGAGG LRRLVESYLC MEHRDGGRMC CPLAFLATDA ARQDAAIRGS 
YTRTFEAFVA RLEAGMPATA TGARLRALQV AVGMIGGLAL ARAVDDAELA EEILAACQTG 
CLSLLE