| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51610 |
|---|
| Symbol | |
|---|
| ID | 7764000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5249276 |
|---|
| End bp | 5249974 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807979 |
|---|
| Product | 3-oxoacid CoA-transferase |
|---|
| Protein accession | YP_002802213 |
|---|
| Protein GI | 226947140 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAC TCGACAAGCG CGTGAATACC TACGAAGAGG CCCTGGCAGG GCTCACCGAC
GGCATGACCG TCCTGGCCGG CGGCTTCGGT CTGTGCGGTA TCCCGGAAAA CCTGATCGCC
GAGATCCGCC GCCGGCGGGT CAAGGGGCTG ACGGTGGTTT CCAACAACTG CGGCATCGAC
GGCTTCGGCC TGGGCGTGCT GCTCGAGGAG CGGCAGATCC GCAAGATGAT CGCCTCCTAC
GTCGGCGAGA ACGCCCTGTT CGAGCGCCAG TTGCTCGACG GCGAGCTGGA GGTCGAACTG
ACCCCGCAGG GCACCCTGGC CGAGAAGCTG CGCGCCGGCG GCGCGGGCAT TCCCGCCTTC
TACACCGCGA CCGGCTACGG CACCCCGGTC GCCGAGGGCA AGGAGGTCCG CGAGTTCCGC
GGTCGGCGCT ACATCCTCGA AGAGGCGATC AGCGGCGACT TCGCCATCGT CAAGGGCTGG
AAGGCCGATC ACTTCGGCAA CGTCGTCTAC CGCCACACCG CGCAGAACTT CAATCCGGTG
GTGGCCACCG CCGGGCGGAT CACCGTGGTC GAGGTGGAGG AGATCGTCGA ACCCGGCGAA
CTGGAACCCA GCCAGATCCA CACCCCCGGT ATCTATGTCG ACCGCGTGAT CCTCGGCCAT
TTCGAGAAAC GCATCGAACA GCGCACCGTC CGCGCCTGA
|
|---|
| Protein sequence | MAGLDKRVNT YEEALAGLTD GMTVLAGGFG LCGIPENLIA EIRRRRVKGL TVVSNNCGID
GFGLGVLLEE RQIRKMIASY VGENALFERQ LLDGELEVEL TPQGTLAEKL RAGGAGIPAF
YTATGYGTPV AEGKEVREFR GRRYILEEAI SGDFAIVKGW KADHFGNVVY RHTAQNFNPV
VATAGRITVV EVEEIVEPGE LEPSQIHTPG IYVDRVILGH FEKRIEQRTV RA
|
|---|
| |