| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51570 |
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| Symbol | |
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| ID | 7763996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 5245065 |
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| End bp | 5246582 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643807975 |
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| Product | multidrug efflux pump RND-family outer membrane protein |
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| Protein accession | YP_002802209 |
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| Protein GI | 226947136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0329698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACG GATACCTGAC CCTGGCGGCC GCCTGCGCCC TGGCACTGCC GGGCTGCACC
CTGATCCCGG ACTACCTGCG CCCGGCCGCG CCGGTCGAGG CCGCCTGGCC GGAGGGGGCC
GCCTACGCGC CGGAGCGACC GGCCAACGTG CCGGCCGCGG ATGTCGGCTG GGAGGAGTTC
TTCCGCGATC CGGCGCTCAA GCAACTGGTC GAACTGGCCC TGGACAACAA CCGCAACCTG
CGCCAGGCGA TCCTCAACGT GGATGCCTAC CGGGCGCTGT ACCGCGTGCA GCGTTCCGAC
CTGTTCCCCA AGCTCGGCGT GGAAGGCACC CAGAGCCGCC AGCGCTGGCC GGGCGACTAT
GCCAGCGGCG GCGGCGGCGG GTCCAGCGGC GGCATCAGCG ATGGCGGCGG CGCGGGCGGC
ACCTCGACCA GCGAGCCCCC GGCGTTCATC CAGACCAGCC ACCAGGTGAC CCTCGGCACC
AGTTCCTGGG AACTGGACTT CTTCGGACGC ATCCGCAGCC TCACCGAGCA GGCCAAGGAA
GACTACCTGG CCATCGAGGA AAACCGACAG AACGTGCACC TCGTCCTGGT CGGCGACGTG
GCCACCGCCT ACTTCGCCTG GCGCACCGAC CAGGCCCTGC TCAAGCTGAC CGAAGCGACC
CTGGCCAGCT ACGAGGAAAG CCTCGCGCTG ATCGAGGCCA GCGAGGAAGT CGGCGTTTCC
TCGCAGCTCG ACGTGCGCCA GGCGCACACC CTGGTGGACC AGGCCCGCGC GCAGAAGTCG
CTCTACACCC GGCAGATCGC CGAGGACGTC AACGCCCTGC GGCTGCTGAT CGGCGGTGCC
TTCCCGAGCG ACCTGCCGGC CGGCCTCGAC GTCAACGACG AGATGCTCGC CGGCTTCCCC
GCCGGGCTGC CCTCCGACCT GCTGCTGCGC CGGCCGGACA TCCGCGCCGC CGAACACCGC
CTGCTGGCCG CCAACGCCAG CATCGGCGCG GCGCGCGCGG CGTTCTTCCC GAGCGTCACC
CTGACCGCCC GGGCGGGTAC CGCCAGCCGC GAGCTGTCGG GTCTGTTCGA CGCCGGCTCC
GGCAGTTGGA GCGCCTTGCC GACGATCAAC ATCCCGATCT TCACCTTCGG CGATCTCAGG
GGAAGTCTGG AATACGCCAA GCTGCAGAAG GAAATCAACG TCGCCGCCTA CGAGTACAGC
ATCCAGACCG CCTTCCGCGA GGTCGCCGAC GGCCTGGCCG CGCGCGGCAC CTACGATACC
CAGCTCAAGG CCCAGGGCGA CCTGGTCGAC AACAACCAGG CGTACTACGA ACTGGCCCGC
CAGCGCTACG AGGAAGGCGT CGACAGCTAC CTGTCGGTGC TCGACGCCCA GCGCGAACTC
TTCTCCGCCC AGCAGCAACT GCTCAACGAC CGTCTCCTGC AACTGAATGG CGAAGTCGGC
CTGTACAGGG CGCTCGGCGG CGGCTGGGAG CGCAACAGCG TCGCGGGCGC GACCACCACG
GCGGCCGCCA CGCCGTAA
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| Protein sequence | MKHGYLTLAA ACALALPGCT LIPDYLRPAA PVEAAWPEGA AYAPERPANV PAADVGWEEF
FRDPALKQLV ELALDNNRNL RQAILNVDAY RALYRVQRSD LFPKLGVEGT QSRQRWPGDY
ASGGGGGSSG GISDGGGAGG TSTSEPPAFI QTSHQVTLGT SSWELDFFGR IRSLTEQAKE
DYLAIEENRQ NVHLVLVGDV ATAYFAWRTD QALLKLTEAT LASYEESLAL IEASEEVGVS
SQLDVRQAHT LVDQARAQKS LYTRQIAEDV NALRLLIGGA FPSDLPAGLD VNDEMLAGFP
AGLPSDLLLR RPDIRAAEHR LLAANASIGA ARAAFFPSVT LTARAGTASR ELSGLFDAGS
GSWSALPTIN IPIFTFGDLR GSLEYAKLQK EINVAAYEYS IQTAFREVAD GLAARGTYDT
QLKAQGDLVD NNQAYYELAR QRYEEGVDSY LSVLDAQREL FSAQQQLLND RLLQLNGEVG
LYRALGGGWE RNSVAGATTT AAATP
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