| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51190 |
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| Symbol | algE1 |
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| ID | 7763964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5194329 |
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| End bp | 5198540 |
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| Gene Length | 4212 bp |
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| Protein Length | 1403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643807944 |
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| Product | Secreted mannuronan C-5 epimerase |
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| Protein accession | YP_002802178 |
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| Protein GI | 226947105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.156968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTACA ACGTCAAGGA TTTCGGAGCA CTGGGCGATG GCGTCAGCGA CGACACGGCG
GCCATCCAGG CGGCGATCGA CGCCGCCCAC GCGGCGGGCG GCGGCACCGT CTACCTGCCG
GCCGGCGAAT ATCGGGTCAG CGGCGGCGAG GAGCCTTCCG ATGGTTGTCT GACCATCAAG
AGCAACGTCC ATATCGTCGG CGCCGGGATG GGCGAGACGG TCATCAAGCT GGTCGATGGC
TGGGAGCAGG ACGTCACCGG CATGGTGCGC TCGGCTTATG GCGAGGAGAC CAGCAACTTC
GGCATGAGCG ACCTGACCCT CGACGGCAAC CGCGACAACG TGTCTGCCAA GGTCGACGGC
TGGTTCAACG GCTACATCCC CGGCCAGGAC GGCGCCGACC GCGACGTGAC CCTGGAGCGG
GTGGAAATCC GCGAAATGTC CGGTTACGGT TTCGACCCGC ACGAGCAGAC CATCAACCTG
ACGATCCGCG ACAGCGTGGC TCACGACAAC GGCCTCGACG GCTTCGTCGC CGACTACCAG
GTCGGCGGGG TGTTCGAGAA CAACGTCTCG TACAACAACG ACCGCCACGG CTTCAACATC
GTCACCAGCA CCAACGACTT CGTCCTGAGC AACAACGTCG CCTACGGCAA CGGCGGCGCC
GGCCTGGTGG TACAGCGCGG GTCATCCGAC CTGCCCCATC CCTACGACAT CCTGATCGAC
GGCGGCGCCT ACTACGACAA CGGCCTGGAA GGCGTGCAGC TCAAGATGGC CCACGACGTC
ACCCTGCAGA ACGCCGAGAT CTACGGCAAC GGCCTGTACG GGGTGCGCGT CTACGGCGCC
CAGGACGTGC AAATCCTCGA CAACCAGATC CACGACAATT CGCAGAACGG CGCCTATGCC
GAAGTCCTGC TGCAGTCCTA CGACGACACC GCCGGGGTGT CCGGCAACTT CTACGCCACC
ACCGGCACCT GGATCGAGGG CAACACCATC GTCGGCTCGG CCAATTCCAC CTACGGCATC
CAGGAGCGCG CCGACGGCAC CGACTACAGC AGCCTCTACG CCAACAGCAT CGACGGTGTG
CAGACCGGGG CGGTACGGCT GTATGGCGCC AACTCGACGG TTTCCAGCCA GTCCGGCACC
GGCCAGCAGG CGACCCTCGA AGGCAGCGCG GGCAACGATG CGCTGAGCGG GACCGAGGCC
CACGAGACGC TGCTCGGCCA GGCCGGCGAC GACCGCCTGA ACGGCGATGC CGGCAACGAC
ATCCTCGACG GCGGGGCAGG GCGCGACAAC CTGACCGGCG GCGCGGGCGC CGACACCTTC
CGCTTCTCCG CGCGCACCGA CAGCTACCGC ACCGACAGCG CCAGCTTCAA CGACCTGATC
ACCGACTTCG ACGCCGACGA GGACAGCATC GACCTGTCCG CGCTGGGCTT CACCGGCCTG
GGCGACGGCT ACAATGGCAC CCTGCTGCTG AAGACCAACG CCGAGGGTAC GCGCACCTAC
CTGAAGAGCT ACGAAGCGGA CGCCCAGGGC CGGCGCTTCG AGATCGCCCT GGACGGCAAC
TTCACCGGTC TGTTCAACGA CAACAACCTG TTGTTCGACG CCGCTCCGGC CACCGGTACC
GAGGGCAGCG ACAACCTGCT CGGCACCGAT GCCAACGAGA CCCTCCTGGG CTACGGCGGC
AACGACACCC TCAACGGCGG GGCCGGCGAC GACATCCTGG TCGGCGGCGC CGGGCGCGAC
ACCCTCACCG GTGGCGCCGG GGCGGACGTG TTCCGCTTCG ACGCGCTGTC CGACAGCCAG
CGCAACTACA CCACCGGCGA CAACCAGGCC GACCGCATTC TCGACTTCGA CCCGACCCTG
GACAGGATCG ACGTATCGGC GCTGGGCTTC ACCGGGCTGG GCAACGGCCG CAACGGCACC
CTCGCCGTGG TGCTCAACAG CGCCGGCGAC CGCACCGATC TGAAGAGTTA CGACACCGAC
GCCAACGGCT ACAGCTTCGA GCTTTCCCTC GCGGGCAACT ACCAGGGGCA GCTCAGCGCC
GAGCAGTTCG TTTTCGCGAC GTCTCAGGGG GGACAGATGA CGATTATCGA AGGCACCGAC
GGCAACGATA CCTTGCAGGG CACCGAGGCC AACGAGCGGC TCCTCGGCCT GGACGGCCGG
GACAACCTGA ACGGCGGCGC CGGCAACGAC ATCCTCGACG GCGGAGCGGG GCGCGACACC
CTGACCGGCG GCACGGGCGC CGACACCTTT CTGTTCTCCA CGCGTACCGA CAGCTACCGC
ACCGACAGCG CCAGCTTCAA CGACCTGATC ACCGACTTCG ATCCCACCCA GGACCGCATC
GACCTGTCCG GCCTGGGCTT CAGCGGTTTC GGCAACGGCT ACGACGGCAC CCTGCTGCTG
CAGGTCAACG CCGCGGGCAC CCGCACCTAC CTGAAGAGTT TCGAGGCCGA TGCCAACGGC
CAGCGCTTCG AGATCGCCCT GGACGGCGAC TTCAGCGGCC AACTGGACAG CGGCAACGTG
ATCTTCGAGC CCGCCGTGTT CAATGCCAAG GACTTCGGCG CGCTGGGCGA CGGCGCCAGC
GACGACCGGC CGGCCATCCA GGCGGCGATC GACGCCGCCT ACGCGGCCGG TGGCGGCACC
GTCTACCTGC CGGCCGGCGA GTACCGGGTC AGCCCCACCG GGGAGCCGGG CGACGGCTGC
CTGATGCTCA AGGACGGCGT CTACCTGGCC GGCGACGGCA TAGGCGAAAC GGTCATCAAG
CTGATCGACG GCTCCGACCA GAAGATCACC GGCATGGTCC GCTCGGCCTA TGGCGAAGAG
ACCAGCAACT TCGGCATGCG CGACCTGACC CTCGACGGCA ACCGCGACAA CACCAGCGGC
AAGGTCGACG GCTGGTTCAA CGGCTACATC CCCGGCCAGG ACGGCGCCGA CCGCAACGTG
ACCATCGAGC GGGTGGAAAT CCGCGAGATG TCCGGCTACG GCTTCGATCC GCACGAGCAG
ACCATCAACC TGACGATCCG CGACAGCGTG GCCCACGACA ACGGCCTCGA CGGCTTCGTC
GCCGACTATC TGGTCGACAG CGTGTTCGAG AACAACGTCG CCTACAACAA CGACCGCCAC
GGCTTCAACG TGGTCACCAG CACCTACGAT TTCGTCATGA CCAACAACGT CGCCTACGGC
AACGGCGGCG CCGGCCTGAC GATCCAGCGG GGCTCGGAGG ACCTGGCCCA GCCGACCGAT
ATCCTGATCG ACGGCGGCGC CTACTACGAC AACGCCCTGG AAGGCGTGCT GTTCAAGATG
ACCAACAACG TCACCCTGCA GAACGCCGAG ATCTACGGCA ACGGCTCCTC CGGCGTGCGC
CTGTACGGCA CGGAGGACGT GCAGATCCTC GACAACCAGA TTCACGACAA TTCGCAGAAC
GGCACCTATC CGGAAGTCCT GCTGCAGGCC TTCGACGACA GCCAGGTCAC CGGTGAGCTG
TACGAGACCC TGAACACCCG GATCGAAGGC AATCTCATCG ACGCTTCGGA CAACGCCAAC
TATGCGGTGC GCGAGCGCGA CGACGGCAGC GACTACACCA CGCTCGTGGA CAACGACATC
AGCGGCGGCC AGGTCGCCTC GGTGCAGCTT TCCGGCGCCC ATTCGAGTCT TTCCGGCGGC
ACCGTCGAAG TGCCGCAGGG AACCGACGGC AACGACGTGC TGGTCGGCAG CGATGCCAAC
GACCAGCTCT ACGGCGGAGC CGGCGACGAC CGCCTGGACG GCGGCGCCGG TGACGACCAG
CTCGACGGCG GAGCGGGGCG CGACGACCTG ACCGGCGGCA CGGGTGCCGA CACCTTCGTG
TTCGCCGCGC GTACCGATAG CTACCGCACC GACGCGGGGG TGTTCAACGA CCTGATCCTC
GACTTCGACG CCAGCGAGGA CCGCATCGAC CTGTCCGCCC TGGGCTTCAG CGGCTTCGGC
GACGGCTACA ACGGCACCCT GCTGGTGCAG CTCAGCAGCG CCGGAACCCG TACCTACCTC
AAGAGCTACG AGGAGGACCT CGAGGGCCGG CGCTTCGAGG TCGCCCTGGA CGGCGACCAC
ACGGGCGATC TTTCCGCCGC CAATGTGGTT TTCGCCGACG ACGGCTCGGC CGCCGTGGCG
AGCAGCGATC CCACCGCCAC ACAGTTGGAG GTGGTCGGCA GCAGCGGCAC CCAGACCGAT
CAACTCGCCT GA
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| Protein sequence | MDYNVKDFGA LGDGVSDDTA AIQAAIDAAH AAGGGTVYLP AGEYRVSGGE EPSDGCLTIK
SNVHIVGAGM GETVIKLVDG WEQDVTGMVR SAYGEETSNF GMSDLTLDGN RDNVSAKVDG
WFNGYIPGQD GADRDVTLER VEIREMSGYG FDPHEQTINL TIRDSVAHDN GLDGFVADYQ
VGGVFENNVS YNNDRHGFNI VTSTNDFVLS NNVAYGNGGA GLVVQRGSSD LPHPYDILID
GGAYYDNGLE GVQLKMAHDV TLQNAEIYGN GLYGVRVYGA QDVQILDNQI HDNSQNGAYA
EVLLQSYDDT AGVSGNFYAT TGTWIEGNTI VGSANSTYGI QERADGTDYS SLYANSIDGV
QTGAVRLYGA NSTVSSQSGT GQQATLEGSA GNDALSGTEA HETLLGQAGD DRLNGDAGND
ILDGGAGRDN LTGGAGADTF RFSARTDSYR TDSASFNDLI TDFDADEDSI DLSALGFTGL
GDGYNGTLLL KTNAEGTRTY LKSYEADAQG RRFEIALDGN FTGLFNDNNL LFDAAPATGT
EGSDNLLGTD ANETLLGYGG NDTLNGGAGD DILVGGAGRD TLTGGAGADV FRFDALSDSQ
RNYTTGDNQA DRILDFDPTL DRIDVSALGF TGLGNGRNGT LAVVLNSAGD RTDLKSYDTD
ANGYSFELSL AGNYQGQLSA EQFVFATSQG GQMTIIEGTD GNDTLQGTEA NERLLGLDGR
DNLNGGAGND ILDGGAGRDT LTGGTGADTF LFSTRTDSYR TDSASFNDLI TDFDPTQDRI
DLSGLGFSGF GNGYDGTLLL QVNAAGTRTY LKSFEADANG QRFEIALDGD FSGQLDSGNV
IFEPAVFNAK DFGALGDGAS DDRPAIQAAI DAAYAAGGGT VYLPAGEYRV SPTGEPGDGC
LMLKDGVYLA GDGIGETVIK LIDGSDQKIT GMVRSAYGEE TSNFGMRDLT LDGNRDNTSG
KVDGWFNGYI PGQDGADRNV TIERVEIREM SGYGFDPHEQ TINLTIRDSV AHDNGLDGFV
ADYLVDSVFE NNVAYNNDRH GFNVVTSTYD FVMTNNVAYG NGGAGLTIQR GSEDLAQPTD
ILIDGGAYYD NALEGVLFKM TNNVTLQNAE IYGNGSSGVR LYGTEDVQIL DNQIHDNSQN
GTYPEVLLQA FDDSQVTGEL YETLNTRIEG NLIDASDNAN YAVRERDDGS DYTTLVDNDI
SGGQVASVQL SGAHSSLSGG TVEVPQGTDG NDVLVGSDAN DQLYGGAGDD RLDGGAGDDQ
LDGGAGRDDL TGGTGADTFV FAARTDSYRT DAGVFNDLIL DFDASEDRID LSALGFSGFG
DGYNGTLLVQ LSSAGTRTYL KSYEEDLEGR RFEVALDGDH TGDLSAANVV FADDGSAAVA
SSDPTATQLE VVGSSGTQTD QLA
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