| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_50700 |
|---|
| Symbol | |
|---|
| ID | 7763919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 5137651 |
|---|
| End bp | 5138601 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643807899 |
|---|
| Product | ABC transporter ATP binding component |
|---|
| Protein accession | YP_002802133 |
|---|
| Protein GI | 226947060 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.933141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCC TCGCACTCGC GAACCTGCTT CGCCGTCCCC GCCCGAGCCG CCCGGCCCCG
CCGGAACGCC TGCACTTCCA CCTGCGCAAA CGCCTGGCTT CGGCCAGCGG CCCCATCGAA
CTGGATGTCG AACTGAGTCT CGAACGCGGC GCGAGCCTCG CCCTGCTCGG TCCTTCCGGC
AGCGGCAAGA CCAGCCTCCT GCGCCTGCTC GCCGGACTGC AGCCGGCGGA CGACGGCCAT
ATCGCCGCCT TCGGCCGGAT CTGGCTGGAC AGCGCGCGCG GCATCGATCG TCCGCCCCGC
CGACGCCGTG CCGGACTGGT GTTCCAGGAC TACGCGCTGT TTCCCAACAT GAGCGTGCGA
GGCAACGTGC GCTTCGCCCT GCCTTCCGGC AGGTCCGAGC GGCGCGCCGA CGAACTGCTC
GAACTGGTCG GCCTCGCCGG CCTGGCCGGG GAAAACCCGC TGCGCCTGTC CGGTGGCCAG
CAGCAGCGCC TGGCCCTGGC CCGCGCCCTG GCCGCGGAGC CGGACCTGCT GCTGCTCGAC
GAACCGCTCT CGGCCCTCGA CGGCGCCCTG CGCCGCGATC TGCAAGACGC CCTGGCCGCC
CTGCGTGAGC ACCGGCGCAC CACCCTGGTG CTGGTCACTC ACGATCCGGG CGAAGCCCTG
CGCCTGTGCG AACGCGCGGT GCTGCTGGAG GGCGGCCGGG TGGCCGCCGA CACGACACCG
GCCCGGCTGT TCGGCGCAGG CCGCTTCGCC GACGCGGAGA ACCGTCTGAT TCTCGCCGGC
CGGGTGGTCG AACGGCTCAG CGCCGCCGAC GGCAGCCCGC TCTACCGCAT CGAGGCCGAG
GGCCGTATCT GCCTCGCCCG CCCGGCGGAG AGCGTCCGCA TGGAGCCGGG CGACAGCGTG
CTGGTCAGCG CCGGGGACTG GCTGGCGACG CCGCTCCGGA GCCTGCACTG A
|
|---|
| Protein sequence | MSVLALANLL RRPRPSRPAP PERLHFHLRK RLASASGPIE LDVELSLERG ASLALLGPSG
SGKTSLLRLL AGLQPADDGH IAAFGRIWLD SARGIDRPPR RRRAGLVFQD YALFPNMSVR
GNVRFALPSG RSERRADELL ELVGLAGLAG ENPLRLSGGQ QQRLALARAL AAEPDLLLLD
EPLSALDGAL RRDLQDALAA LREHRRTTLV LVTHDPGEAL RLCERAVLLE GGRVAADTTP
ARLFGAGRFA DAENRLILAG RVVERLSAAD GSPLYRIEAE GRICLARPAE SVRMEPGDSV
LVSAGDWLAT PLRSLH
|
|---|
| |