| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_50590 |
|---|
| Symbol | hoxK |
|---|
| ID | 7763908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5124351 |
|---|
| End bp | 5125427 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807888 |
|---|
| Product | Uptake hydrogenase small subunit (Precursor), HoxK |
|---|
| Protein accession | YP_002802122 |
|---|
| Protein GI | 226947049 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAC TCGAAACTTT CTATGACGTG ATGCGGCGTC AGGGCATCAC GCGCCGCAGC
TTTCTCAAAT ATTGCAGCCT GACCGCCGCG GCCCTGGGCC TCGGCCCGGC CTTCGCCCCG
CGGATCGCCC ACGCGATGGA AACCAAGCCG CGCACTCCGG TGCTCTGGCT GCACGGCCTG
GAGTGCACCT GCTGCTCCGA GTCGTTCATC CGTTCGGCCC ACCCGCTGGT CAAGGACGTG
GTGCTGTCGA TGATCTCGCT GGACTACGAC GACACCCTGA TGGCCGCCGC CGGCCACCAG
GCCGAGGCCG CCCTCGAAGA GACCATGCGC AAGTACAAGG GCGAGTACAT CCTCGCCGTG
GAGGGCAACC CGCCGCTCAA CGAGGACGGC ATGTTCTGCA TCGTCGGCGG CAAGCCGTTC
ATCGAGCAGC TCAGGCATGT GGCGAAGGAC GCCAAGGCGG TGATCGCCTG GGGCAGTTGC
GCCAGTTGGG GCTGCGTGCA GGCGGCCCGG CCCAACCCGA CCCAGGCGGT GCCGATCCAC
AAGGTCATCA CCGACAAGCC GATCGTCAAG GTGCCCGGCT GCCCGCCGAT CGCCGAGGTG
ATGACCGGGG TGATCACCTA CATGCTGACC TTCGGCAAGC TGCCCGAGCT GGACCGCCAG
GGGCGGCCGA AGATGTTCTA CGGCCAGCGC ATCCACGACA AGTGCTACCG CCGCCCGCAC
TTCGACGCCG GCCAGTTCGT CGAGCACTGG GACGACGAGG GCGCGCGCAA GGGCTACTGC
CTGTACAAGG TCGGCTGCAA GGGCCCGACC AGCTACAACG CCTGCTCGAC GGTGCGCTGG
AACGAGGGCA CTTCCTTCCC GATCCAGGCC GGCCACGGCT GCATCGGCTG CTCGGAGGAC
GGTTTCTGGG ACAAGGGCTC GTTCTATGAA CGCCTGACCA CCATTCCGCA GTTCGGCATC
GAGAAGAACG CCGACGAAAT CGGCGCCGCC GTCGCCGGCG GGGTCGGCGC GGCCATCGCC
GCGCATGCCG CGGTCACCGC CATCAAGCGC CTGCAGAACA AGGGGGATCG CCCATGA
|
|---|
| Protein sequence | MSRLETFYDV MRRQGITRRS FLKYCSLTAA ALGLGPAFAP RIAHAMETKP RTPVLWLHGL
ECTCCSESFI RSAHPLVKDV VLSMISLDYD DTLMAAAGHQ AEAALEETMR KYKGEYILAV
EGNPPLNEDG MFCIVGGKPF IEQLRHVAKD AKAVIAWGSC ASWGCVQAAR PNPTQAVPIH
KVITDKPIVK VPGCPPIAEV MTGVITYMLT FGKLPELDRQ GRPKMFYGQR IHDKCYRRPH
FDAGQFVEHW DDEGARKGYC LYKVGCKGPT SYNACSTVRW NEGTSFPIQA GHGCIGCSED
GFWDKGSFYE RLTTIPQFGI EKNADEIGAA VAGGVGAAIA AHAAVTAIKR LQNKGDRP
|
|---|
| |