| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_50450 |
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| Symbol | hypD |
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| ID | 7763894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5112816 |
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| End bp | 5113955 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643807874 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002802108 |
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| Protein GI | 226947035 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0216438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACG TCGACGAATT CCGCGACGGC GCCACCGCGC GCCAGCTCGC CGCGCGCATC
GCCGCCGAGG CCGATCCGAA GCGCCAGTAC CGGCTGATGG AGTTCTGCGG CGGGCACACC
CACGCGATCT TCCGCTACGG CATCCCCGAC CTGCTGCCGG CCAACGTGCG GCTGATCCAC
GGCCCCGGCT GCCCGGTCTG CGTGATGCCG ATCGGCCGCC TGGACATGGC CATCGAACTG
GCGCGCCGCC CCGGCGTGAT CCTCTGCACC TACGGCGACA TGTTGCGCGT GCCCGCCTCC
GGGCGCGTCA GTCTGCTCAA GGCGCGCGCC GAAGGCGCCG CAGTGCGCAT GCTCTACTCG
CCGATCGAGG CGCTGAAGCT GGCCCAGGAC AACCCGGACA GGGACGTGGT GTTCTTCGCC
ATCGGCTTCG AGACCACCAC GCCGCCCACC GCGCTGGTGA TCGAACAGGC GCAGAGGCTC
GGCTTGAAGA ACTTCTCGGT GTTCTGCAAC CACGTGCTGA CCCCGGCGGC GATGCACGCC
ATCCTCGCCA CCCCGGAGGC GCGCGCCGGC ACGCTGCAAC TGGACGGCTT CATCGGCCCG
GCCCACGTCA GCACGGTGAT CGGCAGCGAC GCCTACGCGC CCTTCCCGCG TCAGTACGGC
ACGCCGCTGG TGATCGCCGG CTTCGAACCG CTGGACCTGT TGCAGGCGCT GCTGATGCTG
GTGCGCCAGC TCAACGAGGG GCGTGCCGAG GTGGAAAACC AGTTCACCCG CGCGGTCACC
GCAGGCGGCA ATCTCAAGGC GAAGGCGCTG ACCGGGCGGA TCTTCGAGCT GCGCGAGAGT
TTCGAGTGGC GCGGCCTGGG CGCGCTGCCG AACAGCGCCC TGCGGATCCG CGAGGCCTTC
GCCGAATTCG ACGCCGAGCG GCGCTTCGCT CTCGAAGCGC GCAGCGGCCT GGAGAACAAG
GCCTGCGAAT GCCCGGCGAT CCTCCGCGGG GCGAAGAGCC CGCGCGACTG CAAGCTGTTC
GGCAACCCCT GCAGCCCGGA CAATCCGCTC GGCTCGTGCA TGGTTTCCTC CGAGGGCGCC
TGCGCCGCCT GGTACGCCTA CGGCCGCCAG CGCCAGGCCG TCGTGGCGGT GGCCCGATGA
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| Protein sequence | MKYVDEFRDG ATARQLAARI AAEADPKRQY RLMEFCGGHT HAIFRYGIPD LLPANVRLIH
GPGCPVCVMP IGRLDMAIEL ARRPGVILCT YGDMLRVPAS GRVSLLKARA EGAAVRMLYS
PIEALKLAQD NPDRDVVFFA IGFETTTPPT ALVIEQAQRL GLKNFSVFCN HVLTPAAMHA
ILATPEARAG TLQLDGFIGP AHVSTVIGSD AYAPFPRQYG TPLVIAGFEP LDLLQALLML
VRQLNEGRAE VENQFTRAVT AGGNLKAKAL TGRIFELRES FEWRGLGALP NSALRIREAF
AEFDAERRFA LEARSGLENK ACECPAILRG AKSPRDCKLF GNPCSPDNPL GSCMVSSEGA
CAAWYAYGRQ RQAVVAVAR
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