| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_50220 |
|---|
| Symbol | |
|---|
| ID | 7763873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 5090803 |
|---|
| End bp | 5091942 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643807853 |
|---|
| Product | LacI regulatory protein |
|---|
| Protein accession | YP_002802087 |
|---|
| Protein GI | 226947014 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTGG GGAGGGAATT GGGCTGCTAT AGTCCGGCCG CGTTATATGT CAGAACATCT
CAAGGACAGC AGAAGAGCTT TCATTTCATG CCTGAACCCG TCAGCCCTCC GCCCCGGCGT
CCTACCCTGC AGGATGTCGC CCGCGCCGCC GGCGTGAGCC TGTCGACCGT CGACCGGGTG
ATCAACCTGC GCGCCAACGT GCGCGCCGAC ACCGCGCGGC GCATCGCCGA GGCGGCGGCG
CGGCTGGGCT TCCATGGCCG CGGCGTCATC GAGCAGCGCC TGCTGGAACA GCGCCGGACC
GTGCGCCTCG GCTTCCTGCT GTGGAAACGC AACACGGCCT TCTACCGCGG GCTGGCCGAC
GGACTGGCCG AAGCCGCCGC GGCCTGCGTC CGGGCCCAGG TGCGGGTGAC GATCGGCTAC
CTGGACAACC TGGACCCGGA GGCGACCGCG GCGCGCATGC TGGCCCTGCG CGGCGAGGTG
GACGCGCTGG GCATAGTCGC CGCCGACCAC CCGGCCGTGC GCGAGGCGGC GACCGCCCTG
CGCGCGGCGA GCCTGCCGGT GGCGGCGCTG GTTTCCGAGC TGGCCGCCTC GACCGGGGCG
GGCTACGTCG GCCTGGACAA CCGGCGCGTG GGCCGCACGG CCGCCTGGTT CGTCGCGCAG
CTCGCCCGCC AGCCGGGGGC CGTGGCGCTC ATGGTCGGCA GCCAGCGCTT CCAGTGCCAG
GAACTCTGCG AACTGAGCTT CCGCAGTTTC CTGCGCGAGC ACTCCGAGGA CTGGGAACTG
CCGGCGCCGC GCCTGACCCT GGAGGACGAA ACCTTCGCCT ACGAGAACAC CCTGGATCTG
CTCAGCGGCC AGCCCGACCT GGCCGGGCTC TACGTCGGCG GCGGCGGGAT CGAGGGCGTC
CTGCGCGCCC TGCGCGAGCA GCGCGGCGCC CGGCCGGTGG TGGTCTGCCA CGACCTGACG
CCGGTGACGC GGGCCGCCCT GAACGATGGG ATCGTGCAGG TCGTGCTCTC GCATCCGCTG
GCCGAGCTGG CGCGCTCGGC GGTGGACCTG CTGGTCGAGG CCGCGACAGG CCGGGAAGCG
ACGTCCGCGC TGCCCAAGCG CATCCTGCCC ATCCAGATCG ATATTCCCGA AAGCGTCTGA
|
|---|
| Protein sequence | MLLGRELGCY SPAALYVRTS QGQQKSFHFM PEPVSPPPRR PTLQDVARAA GVSLSTVDRV
INLRANVRAD TARRIAEAAA RLGFHGRGVI EQRLLEQRRT VRLGFLLWKR NTAFYRGLAD
GLAEAAAACV RAQVRVTIGY LDNLDPEATA ARMLALRGEV DALGIVAADH PAVREAATAL
RAASLPVAAL VSELAASTGA GYVGLDNRRV GRTAAWFVAQ LARQPGAVAL MVGSQRFQCQ
ELCELSFRSF LREHSEDWEL PAPRLTLEDE TFAYENTLDL LSGQPDLAGL YVGGGGIEGV
LRALREQRGA RPVVVCHDLT PVTRAALNDG IVQVVLSHPL AELARSAVDL LVEAATGREA
TSALPKRILP IQIDIPESV
|
|---|
| |