Gene Avin_50170 details

Gene Information

• Locus tag: Avin_50170
• Symbol: hppD
• ID: 7763868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 5085206
• End bp: 5086243
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643807848
• Product: 4-hydroxyphenylpyruvate dioxygenase
• Protein accession: YP_002802082
• Protein GI: 226947009
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
• TIGRFAM ID: [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACA AGAACAATCC CATCGGCCTG CGCGGCATCG AGTTCACCGA ATTCACCGGC 
GGGACGCTCG AACAGCTCGA CGCCCTGTTC TGGGCCTTCG GCTTCTCGAA GAAGTATCGT 
CACCCGAAGC TGGACATCAG CATCTACAAC CAGAACGGCA TCAACTTCCT GCTGAACGGC 
GAGCGTGAAG GCTTCTCCGG TCATTTCGCC AAACTGCACG GCCCGTCGAT CAGCTCCATG 
GGCTGGCGTG TCGACGATGC CGCATTCGCC AGACAGGAAG CCGTCCGTCG CGGCGCGCGC 
GCGGCCGATC CCAAGGACTG CGACCTGCCC TACCCGGCCA TCTACGGCAT CGGCGACAGC 
CTGATCTATT TCATCGAGCG TTTCGGCGCC AGGGGCTCGA TCTACGCAAC CGACTTCGTT 
CCCCACGAGC AGGCCCGGCT CCAGCCGGAC AAAGGCTTCC TGGAGATCGA CCACCTGACC 
AACAACGTGC CGCAAGGCCA GATGGAGCAG TGGGGGGCCT TCTACAAGGA GATCTTCGGT 
TTCACCGAAG TGCGCTACTT CGACATCAAG GGCGTGAAGA CCGGCCTGAC CAGCTATGCG 
CTGCGCTCGC CGGACGGCAG CTTCTGCATC CCGATCAACC AGCCGAAGGA CGACAAGGAC 
CAGATCTCCG AGTACCTGGC CGAGTACAAC GGCCCGGGCG TACAGCACCT GGCCTTCAGC 
ACCAACGACA TCCTCGCCTC GCTGGACGCC ATGAAGGGCG GCCCGATCGA GATGCTCGAC 
ATCGACGCGA ACTACTACGA CAACGTGTTC CAGCGCCTGC CCAACGTGCG CGAGGACAAG 
GAGCGCATCC GCGCCCACCA CGTACTGGTC GACGGCGACC AGGACGGCTA TCTGCTACAG 
ATATTCACCA AGAACATCAT CGGCCCGATC TTCGTCGAGA TCATCCAGCG CGAGAACAAC 
CTGAGCTTCG GCGAAGGCAA CTTCGGCGCC CTGTTCCGCT CCATCGAGAA GGACCAGGAA 
CGTCGCGGCG TAATCTGA 

 

Protein sequence

MSDKNNPIGL RGIEFTEFTG GTLEQLDALF WAFGFSKKYR HPKLDISIYN QNGINFLLNG 
EREGFSGHFA KLHGPSISSM GWRVDDAAFA RQEAVRRGAR AADPKDCDLP YPAIYGIGDS 
LIYFIERFGA RGSIYATDFV PHEQARLQPD KGFLEIDHLT NNVPQGQMEQ WGAFYKEIFG 
FTEVRYFDIK GVKTGLTSYA LRSPDGSFCI PINQPKDDKD QISEYLAEYN GPGVQHLAFS 
TNDILASLDA MKGGPIEMLD IDANYYDNVF QRLPNVREDK ERIRAHHVLV DGDQDGYLLQ 
IFTKNIIGPI FVEIIQRENN LSFGEGNFGA LFRSIEKDQE RRGVI