Gene Avin_50020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_50020 
Symbol 
ID7763854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5067799 
End bp5068728 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID643807834 
ProductSugar isomerase (SIS) 
Protein accessionYP_002802068 
Protein GI226946995 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGTT CCGAATCGCC CGTGGGCGCC GCCGAGGCGC TGCTGGAGGT CCCGGCCAGC 
GTGGAGCGGC TGCAGCAGTT GATCGGCGCG GAATACGAGA GCCTGCCGCG CCAGCTCAAG
CGCATCGCCA ACTACATGAG CCAGCAGAGC GACCGGGTGA TGGTCGACCG GGTCAGCGAC
ATCGCCCAGC AGTGCGAGGT GCATCCCTCG GCCATCGTGC GCTTCTCGCA GCGCTTCGGT
TTCCGGGGGT TCAGCGAGAT GCAGGCGCTG TTCCGCGAGG CCTACACCGA CAAGGCCACG
CCGATCCAGA ACTACCAGCA GCGCATCCGC CGGATGATCG CCAACCGCTC GCACAAGGCG
TCCGGCGGCG AACTGGCGCG CGAGTGCATC AACGCCACCC GCTCGGGACT CGACCGGCTG
GTCCAGGAAC TCGACGAGCG CGAGTTCGAC AAGGCCGTGG ACCTGCTGGT CGAAGCCGAC
AACATCTATG TGATCGGCGT GCGCCGCTCC TTCTCGGTGG CTCACTACCT GGTCTACAGC
CTGCGCCACA CCAACAAGCG CATCCACCTG ATATCCGGCC TGGGCGGCGG CTACCGCGAG
CAGATGCGCA GCGTGCGCGA GGGCGATCTG GTGGTCGCCG TCAGCTTCAG TCCCTACGGC
AAGGAAACCC AGCAGTGCGT GCGTATCGCC CGGCACTACA AGGCCAGGGC CTTGGTCATC
ACCGACAGCC AGTTGGCGCC GCTGGCCAAG CAGGCCAACG CCCTGCTGCT GGTCAACGAG
GGCAGCACCT TCGCCTTCCG CTCGCTCAGT TCCACCCTGA GCCTGTGCCA GGCGCTGTTC
ATCGCCGTGG CCTACCGCAT GGAACTGAAG GTCGAGGAGA TCGGCGTGCC GGGCGGTTTC
GAGGACGGCG AGCCGGACGA TCCCGATTAG
 
Protein sequence
MSSSESPVGA AEALLEVPAS VERLQQLIGA EYESLPRQLK RIANYMSQQS DRVMVDRVSD 
IAQQCEVHPS AIVRFSQRFG FRGFSEMQAL FREAYTDKAT PIQNYQQRIR RMIANRSHKA
SGGELARECI NATRSGLDRL VQELDEREFD KAVDLLVEAD NIYVIGVRRS FSVAHYLVYS
LRHTNKRIHL ISGLGGGYRE QMRSVREGDL VVAVSFSPYG KETQQCVRIA RHYKARALVI
TDSQLAPLAK QANALLLVNE GSTFAFRSLS STLSLCQALF IAVAYRMELK VEEIGVPGGF
EDGEPDDPD