| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49920 |
|---|
| Symbol | |
|---|
| ID | 7763844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5058914 |
|---|
| End bp | 5059846 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807824 |
|---|
| Product | Sugar isomerase (SIS) |
|---|
| Protein accession | YP_002802058 |
|---|
| Protein GI | 226946985 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTT CCGAATCACC CGCCGGCTCC GGCGAAGCGC TGCAGGAGAC GCCGGCCAGC
GTGGAGCGGC TGCTGCAACT GATCACGGCG GAATACGAGA GCCTGCCGCG CCAGCTCAAG
CGCATCGCCA ACTACATGAG CCAGCAGAGC GACCGGGTGA TGGTCGACCG GGTCAGCGAT
ATCGCCCAGC ATTGCGAGGT GCATCCCTCG GCCATCGTGC GCTTTTCCCA GCGCTTCGGC
TTCAAGGGCT TCAGTGAAAT GCAGGCGCTG TTCCGCGAGG CCTACACCGA CAAGGCCACG
CCGATCCAGA ACTACCAGCA GCGCATCCGC CGGATGATCG CCAACCGCTC GCACAAGGCG
TCCGGCGGCG AACTGGCGCG CGAGTGCATC AACGCCACCC GCTCGGGACT CGACCGGCTG
GCCCAGGAAC TCGACGAACG CGAGTTCGAC AAGGCCGTGG ACCTGCTGGT CGAGGCCGAC
AACATCTATG TGGTCGGCGT ACGCCGTTCC TTCGCCGTGG CTCACTACAT GGTCTACAGC
CTGCAGCACA CCAACAAGCG CATCCACCTG ATATCCGGCC TGGGCGGCGG CTACCGCGAG
CAGATGCGCA GCGTGCGCGA GGGCGATCTG GTGGTCGCCG TCAGCTTCAG CCCCTACGGC
AAGGAAACCC AGCAGTGCGT GCGCATCGCC CGGCACCACA AGGCCAGGGC GCTGGTCATC
ACCGACAGCC AGTTGGCGCC GCTGGCCAAG CAGGCCAACG CCCTGCTGCT GGTCAACGAG
GGCAGCACCT TCGCCTTCCG CTCGCTCAGC GCCACCCTGA GCCTGTGCCA GGCGCTGTTC
ATCGCCGTGG CCTACCGCAT GGAGCTGAAG GTCGAGGAGA TCGGCGCGCC GGCCATCCTG
GACGGCGAGG GGGGCGATGA AGGGCCCGCC TGA
|
|---|
| Protein sequence | MSSSESPAGS GEALQETPAS VERLLQLITA EYESLPRQLK RIANYMSQQS DRVMVDRVSD
IAQHCEVHPS AIVRFSQRFG FKGFSEMQAL FREAYTDKAT PIQNYQQRIR RMIANRSHKA
SGGELARECI NATRSGLDRL AQELDEREFD KAVDLLVEAD NIYVVGVRRS FAVAHYMVYS
LQHTNKRIHL ISGLGGGYRE QMRSVREGDL VVAVSFSPYG KETQQCVRIA RHHKARALVI
TDSQLAPLAK QANALLLVNE GSTFAFRSLS ATLSLCQALF IAVAYRMELK VEEIGAPAIL
DGEGGDEGPA
|
|---|
| |