Gene Avin_49590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_49590 
Symbol 
ID7763812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5023962 
End bp5025293 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content66% 
IMG OID643807793 
ProductCitrate transporter 
Protein accessionYP_002802028 
Protein GI226946955 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACTT TCCTCGGCTT CGCCATGGTC TTGACCTTCA TGTACCTGAT CATGACCCAG 
CGCCTCTCGG CGCTGATCGC CCTCATCATC ATTCCCGTGC TGTTCGCCCT GTTCGGCGGT
TTCGCCGGCG ACATCGGACC GATGATGCTG CAGGGCATCA CCAAGCTCGC CCCGACCGGG
GTGATGCTGA TGTTCGCCAT CCTCTACTTC GCCCTGATGA TCGATTCGGG GCTGTTCGAC
CCGCCGGTGC GCTTCATCCT GCGCATGGTC AAGGGCGACC CCTTGCGGGT CTCCGTCGGC
ACCGCCGCCC TAGCGCTGAT CGTTTCTCTC GACGGCGACG GCGCCACCAC CTACATGATC
TGCGTCGCCG CCATGCTGCC GCTGTACAGC CGCATCGGCA TGAACCCGCG GATCATGGCC
GGCCTGATCA TCCTTGCCGG CGGGATCATG AACATGACCC CCTGGGGCGG CCCCACCGCC
CGCGCCGCCA GCGCCCTGCA GGTCGACCCG TCGGACGTGT TCGTACCGAT GATCCCGGCC
ATGGCGATCG GCGTGGCCGT CCTGCTGGGC ATGGCCTACC TGTACGGCAA GCGCGAACGC
GAGCGCCTCG GCGTGTTGCA CCTCTCCGAC GGCAGCGAGG ATCACTCCGA GGTCACCGTC
TCCCAGTATC CCGAGGCGCG CCGGCCGAAG CTGTTGATGA TCAACGCCAT GCTGACCCTG
GGCCTGATGG GTACGCTGAT CACCGGCGTG CTGCCGTTGC CGGTGCTGTT CATGATCGCC
TTCAGCCTCG CCATGATCAT CAACTATCCC TGCCTCAAGG CACAGAAGGA GCGCATCGCC
GCCCACGCCG GCAACGTGCT GGCGGTGGTC GGCCTGATCT TCGCCGCCGG CATCTTCACC
GGCATCCTCT CCGGCACCGG GATGGTCGAC TCCATGTCGA AGAGCCTGCT GGCGCTGATC
CCGGACGCGA TGGGGCCCTA TCTCGCCGTG GTGACCGCGC TGGTGAGCAT GCCCTTCACA
TTCTTCATGT CCAATGACGC CTTCTACTAC GGCGTGCTGC CGGTGCTCAC CGAAGCCGCC
GGACACTACG GCATCAGCCC GGTGGAAATG GCGCGCGCCT CGATCGTCGG CCAGCCGGTG
CACCTGCTCA GTCCGCTGGT ACCCTCCACC TACCTGCTGG TGGGCCTGGC GAAGATCGAG
TTCGGCGACC TGCAGCGTTT CGCCCTGAAG CTGGCTACCC TGCTCTGTCT GGCGATAATG
CTCGCCGCGC TGCTGGTCGG CGTCTTTCCG GCGGCCGGCG GTCCAGCCAT CGTTCCGGTG
GCGGCCGGCT GA
 
Protein sequence
MLTFLGFAMV LTFMYLIMTQ RLSALIALII IPVLFALFGG FAGDIGPMML QGITKLAPTG 
VMLMFAILYF ALMIDSGLFD PPVRFILRMV KGDPLRVSVG TAALALIVSL DGDGATTYMI
CVAAMLPLYS RIGMNPRIMA GLIILAGGIM NMTPWGGPTA RAASALQVDP SDVFVPMIPA
MAIGVAVLLG MAYLYGKRER ERLGVLHLSD GSEDHSEVTV SQYPEARRPK LLMINAMLTL
GLMGTLITGV LPLPVLFMIA FSLAMIINYP CLKAQKERIA AHAGNVLAVV GLIFAAGIFT
GILSGTGMVD SMSKSLLALI PDAMGPYLAV VTALVSMPFT FFMSNDAFYY GVLPVLTEAA
GHYGISPVEM ARASIVGQPV HLLSPLVPST YLLVGLAKIE FGDLQRFALK LATLLCLAIM
LAALLVGVFP AAGGPAIVPV AAG