Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_49580 |
Symbol | |
ID | 7763811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 5021653 |
End bp | 5022978 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643807792 |
Product | OprE-like outer membrane porin |
Protein accession | YP_002802027 |
Protein GI | 226946954 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.607029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGA CGCTACTCGC CCAGGGCGCG GCCTTGTCCG CGCTGGGTGC GGCACTGGCC GTTCCTTCCG TTGCCCAGGC GGAGTTCATC AAAGACAGCA AGGCCACGCT GAGCCTCAAG AACTTCTACA TCAACCAGGA CGTCCGCAAC CAGGACGCGC CGCGCTCCGA GGAGTGGGGC CAGGCGTTCT TCCTCGACTA CAAGTCCGGC TTCACCGAGG GTCCGGTCGG CTTCGGCCTC GACGTGCTGG CCATGCACGC CATCCGCCTC GACGGCGGCG GCCGCTCCGG CAAGGCGGAC ATCGAACGCA CCCCGGGCGG CATGTTCCCG CTGGAAAGCA ACGGCAAGGG CAAGACCGAC TTCGGCCGCG TTGGCGTGAC CGGCAAACTG CGCTTCTCCA AGACCGAGGC GCGCCTCGGC ACCCTGCTGC CGAAGATGCC GGTGCTGGTC TACAACGACG GCCGCCTGCT GCCGCAACTG TTCCATGGCG CGCAGATCAC TTCCAACGAG ATCGACAACC TGAGCCTGAC CGCCGGCAAG ATCGAACACT CGACCGAGCG TAACTCCGGC GACAGCCACG GCCTGTCCAT CGGCGGCGCC AACAGCGGCA GCAGGGCGCA GTTCAGCAAC GAGTTCTACT TCGCCGGCGC CGACTACAAG GCCACCAAGG ACCTCCTGCT GCAGTACTAC TACGGCAACC TGCGCGACTT CTACAAACAG CACTTCTTCG GCCTGGTGCA CGACTGGAAG CTGCCGGTGG GTTCGCTGAA GACCGACCTG CGCTACTTCT ACAGCGACTC CGACGGCAAG AACGAGAGCG CCTCCGGGCG TGCCGAGGGC TATGTCAGCA GCGGCGCCGA CGGCAGCAGC GGCGAGGTCG ACAACAACCT GTGGAGTGCG ATGTTCACCT ACAGCCTGGC CGGTCACGCG CTGAGCCTCG GCTACCAGAA GGTCAGTGGC GACAGCGACT TCCCGCACAT CAACCTGGGG AGCGGGCGCA CCCTGCATCT GATCACCAAC GGCCAGATCG GCAAGTTCGC CAGCGCCGGC GAGAACACCT GGGTGGCCGG CTACGCCTAC GACTTCGCGG CGATCGGCGT GCCGGGGTTG AAGACCAAGC TGATCTACTT CAGCGGCGAC GACATCGACG CCGCCGGCAG CGACAACAAG GAGTGGGAAC GCAACTTCCG CATCGACTAC GCGGTGCAGA GCGGCCCGCT CAAGGGCGTC GGCTTCGCCT GGCTCAATGC CGCGACCCGT GGCAACGATG GCCGCGACCT GGACGAGAAT CGCCTGATGC TCACCTACAG TCTGCCGTTG TTCTGA
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Protein sequence | MHKTLLAQGA ALSALGAALA VPSVAQAEFI KDSKATLSLK NFYINQDVRN QDAPRSEEWG QAFFLDYKSG FTEGPVGFGL DVLAMHAIRL DGGGRSGKAD IERTPGGMFP LESNGKGKTD FGRVGVTGKL RFSKTEARLG TLLPKMPVLV YNDGRLLPQL FHGAQITSNE IDNLSLTAGK IEHSTERNSG DSHGLSIGGA NSGSRAQFSN EFYFAGADYK ATKDLLLQYY YGNLRDFYKQ HFFGLVHDWK LPVGSLKTDL RYFYSDSDGK NESASGRAEG YVSSGADGSS GEVDNNLWSA MFTYSLAGHA LSLGYQKVSG DSDFPHINLG SGRTLHLITN GQIGKFASAG ENTWVAGYAY DFAAIGVPGL KTKLIYFSGD DIDAAGSDNK EWERNFRIDY AVQSGPLKGV GFAWLNAATR GNDGRDLDEN RLMLTYSLPL F
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