Gene Avin_49560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_49560 
Symbol 
ID7763809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5019900 
End bp5021081 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content69% 
IMG OID643807790 
ProductAcyl-CoA dehydrogenase 
Protein accessionYP_002802025 
Protein GI226946952 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.531636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC TGCCCGGACT GAATTTCTTT CTCGGCGAGG AGATCGACAT GCTGCGCGAT 
TCGGTGGCCG GCTTCGCCGC CAGGGAGATC GCCCCGCGCG CCGCCGAGGC CGACCGCAGC
GACCGCTTCC CCATGGACCT GTGGCGCAAG TTCGGCGAGA TGGGACTGCT CGGCCTGACC
GTCGCCGAGG AATACGGCGG CGCCGGCATG GGCTACCTGG CGCACATGAT CGCCATGGAG
GAAATCTCCC GCGCCTCGGG CGGGATCGGC CTGTCCTACG GCGCGCATTC CAACCTCTGC
GTCAACCAGA TCCACCGCAA CGGCACGCCG GCGCAGAAGG AGCGCTTCCT GCCCAAACTG
ATCTCCGGCG AACACGTCGG CGCCCTGGCG ATGAGCGAGC CCAACGCCGG CTCCGACGTG
GTGTCCATGC AGTTGCGCGC CGACAGGAAG GGCGACCGCT ACGTGCTCAA CGGCACCAAG
ATGTGGATCA CCAACGGCCC GGACTGCGAC GTGCTGGTGG TCTACGCCAA GACCGACCCG
GCCGCCGGCG CGCGCGGCAT CAGCGCCTTC GTCCTGGAGA AGGACACCCC CGGCTTCTCG
GTGGCGCAGA AGCTCGACAA GCTCGGCATG CGCGGCTCGC ACACCGGCGA ACTGGTGTTC
CGCGACGTGG AGATCCCTGC GGAGAACCTG CTCGGCCGGG AGGGCGAGGG CGTCCGGGTG
CTGATGAGCG GCCTGGACTA CGAGCGCGCC GTGCTCGCCG GCGGGCCGCT GGGGTTGATG
CAGGCGGCGA TGGACGTGGT GGTGCCTTAT ATCCATGAGC GCAGGCAGTT CGGCCAGGCC
ATCGGCGAGT TCCAGTTGAT CCAGGCCAAG GTCGCCGACA TGTACACCAC GCTGCAGGCC
TGTCGCGCCT ACCTCTACGC GGTCGGCCGG CAGCTCGACG CGCTGGGCGC CGGGCACGTG
CGCCAGGTGC GCAAGGACTG CGCCGGGGTG ATCCTCTACT GCGCCGAGAA GGCCACCTGG
CTGGCCGGCG AGGCGATCCA GATCCTCGGC GGCAACGGCT ACATCAACGA CTACCCGACC
GGCCGGCTGT GGCGCGACGC CAAGCTCTAC GAGATCGGCG CCGGCACCAG CGAGATCCGC
CGCATGCTGA TCGGCCGCGA GCTGTTCGAC GAGACGCGCT GA
 
Protein sequence
MSNLPGLNFF LGEEIDMLRD SVAGFAAREI APRAAEADRS DRFPMDLWRK FGEMGLLGLT 
VAEEYGGAGM GYLAHMIAME EISRASGGIG LSYGAHSNLC VNQIHRNGTP AQKERFLPKL
ISGEHVGALA MSEPNAGSDV VSMQLRADRK GDRYVLNGTK MWITNGPDCD VLVVYAKTDP
AAGARGISAF VLEKDTPGFS VAQKLDKLGM RGSHTGELVF RDVEIPAENL LGREGEGVRV
LMSGLDYERA VLAGGPLGLM QAAMDVVVPY IHERRQFGQA IGEFQLIQAK VADMYTTLQA
CRAYLYAVGR QLDALGAGHV RQVRKDCAGV ILYCAEKATW LAGEAIQILG GNGYINDYPT
GRLWRDAKLY EIGAGTSEIR RMLIGRELFD ETR