| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49530 |
|---|
| Symbol | |
|---|
| ID | 7763807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5017244 |
|---|
| End bp | 5018038 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643807788 |
|---|
| Product | gamma-carboxygeranoyl-CoA hydratase |
|---|
| Protein accession | YP_002802023 |
|---|
| Protein GI | 226946950 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0107065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TCACCACCGT ACAACTCGAC TTCGACCCGC GCGGCTTCGC CACCCTCTGG
CTCGACCGCG CGGACAGGAA CAACGCCTTC GATGCCGAAA TGATCCGCGA ACTGATCCTC
GCCCTCGATA TGGTGAAGGA TCGCCGCGAA CTGCGCTTTC TGCTCCTGCG CGGGCGCGGC
CGGCACTTTT CCGCCGGCGC CGACCTGGTC TGGATGCGCG AGGCCGCCGG CCTCGACTAC
GACGCCAACC TGGCCGACGC CCAGACCCTG GCCGAACTGA TGTACAACCT CTACCACCTC
AAGCTGCCGA GCCTGGCCGT GGTGCAGGGC GCGGCCTTCG GCGGGGCGCT GGGGCTGATC
GCCTGCTGCG ACCTGGCGAT CGGCGCCAGT AATGCGCAGT TCTGCCTGTC CGAGGTGCGC
ATCGGCCTCG CCCCGGCGGT GATCGGCCCC TTCGTCGTGC AGGCCATCGG CGAACGCGCC
GCGCGCCGCT ACGCGCTGAG CGGCGAGCGC TTCGACGGCG CGCGCGCGCG CGAGCTGGGC
CTGCTCGCCG AATGCTACCC GGCCGCCGGA CTGGAAGCGG CGCTGGAGCA GTGGATCGCC
ACCCTGCTGC ACAACGGCCC GCAGGCGATG AGGGCGACCA AGGACCTGCT GCGCGAGGTC
GGCAGCGGCG CGCTCAACCC GGCCCTGCGC CGCTACACCG AGAGCGCCAT CGCCCGCCTG
CGGGTCGGCC CGGAAGGCCA GGAGGGCCTG CGCGCCTTCC TGGAGAAACG CCAACCCGCC
TGGCAGGAGC AATGA
|
|---|
| Protein sequence | MTDFTTVQLD FDPRGFATLW LDRADRNNAF DAEMIRELIL ALDMVKDRRE LRFLLLRGRG
RHFSAGADLV WMREAAGLDY DANLADAQTL AELMYNLYHL KLPSLAVVQG AAFGGALGLI
ACCDLAIGAS NAQFCLSEVR IGLAPAVIGP FVVQAIGERA ARRYALSGER FDGARARELG
LLAECYPAAG LEAALEQWIA TLLHNGPQAM RATKDLLREV GSGALNPALR RYTESAIARL
RVGPEGQEGL RAFLEKRQPA WQEQ
|
|---|
| |