| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49350 |
|---|
| Symbol | |
|---|
| ID | 7763790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4995682 |
|---|
| End bp | 4998351 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643807771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002802006 |
|---|
| Protein GI | 226946933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02608] delta-60 repeat domain
[TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAT CGACACTGAG CGGTAGCGTG CCGAACCCTA CGCCCCGCGC GGCCACCGGC
AAGATGCTCG TGGATGTGGG CGGCCACGAC GATTACAGCT ACGCCATGGG CCTGCAGCCC
GACGGCGGGA TTCTGCTGGC GGGCTACAGC TACGACCCCG GCCGCCGGAA CTACGACACC
AGCCTCGTCC GCCTGAATGC CGACGGCACC CTCGACACCG GCTTCGGCGA CCTCGGCAAG
GTCGTCGTCG ACATCGGCGG GAGCGACGGG GCGCGCGGCC TGTCCCTGCA AGCCGACGGC
AAGATCCTCC TCGCCGGCCT GAGCGCGAAC GACTTCGGGG CGATCCGCCT GAACGCCGAC
GGCAGCCTCG ACACCGGTTT CGGCGTCGGC GGCAAGGTCA CCGTCGATAT CGCCGGCAGT
TACGACCAGG CCAATGCCCT GGCCGTGCAG CCCGACGGCA AGATCCTGCT GGCCGGCAAC
GGCCACAACG GCGCGAACTA CGATTTCAGC CTGATCCGCC TGAACGCCGA CGGCTCGCTC
GACACCGGCT TCGGCAATGG CGGCAAGGCC AGCTTCGACG ACGGCGGCCA TGAGTTCGGC
TACGGCCTGG CCCTGCAGGC GGACGGCAAG ATCCTGATGG TCGGGCAGAG CGGCTCCGAC
ATCGGGGTGA TCCGCCTGAA CGCCGACGGC AGCCTGGATG CCGGCTTCGG CGACGGCGGC
AAGGCCATTC TCGATATCGG CGGAGAGATC GACATCGGCC GCAGTCTGAG CCTGCTGCCC
GACGGCAAGA TCCTGGTCGG CGGCTTCAGC TACGACATCA GCGGCGATTA TTACCACTAC
AACTTCAGCC TGATCCGCCT GAACGCCGAC GGCAGCCTCG ATACCGGCTT CGGCGACGGC
GGCACGGCCA TCGTCGATAT CGCCGGCGGC AACGACCAGG GCCACAGCCT GGTCCTACAG
GACGACGGCA AAATCCTCCT CGCCGGCTTC AGCTACCTGC CGGACAGGGG CGCTTACGAC
TTCAGCGTGA TCCGCCTGAA CGCCGACGGC AGTCTGGATG CCGGCTTCGG CGGCGACGGC
AAGGTCACCG TCGATATCGC GCGCGGCTAC GACGAGGGCT ACAGCCTCGC CGTGCAGCCC
GACGGCCGGA TTCTGCTCTC GGGCCTCGGC AACAACTCTG CCAGCGGCCG CTACGACTTC
AGCGTGATCC GCCTGAACGC CGACGGCACG CTCGACACGA ATTTCGGCGC CCTGGACGAT
GGCGTCGACC TCGTCGAAGG CAGCGACGGC GACGACGAAC TGCTCGGCGA CAGCGCCCGC
GAACTGCTCC TCGGCAAGGA CGGCGACGAC CGCCTGGACG GTGGCGCCGG CGACGACACC
CTCGACGGCG GCGCCGGGCG CGACAGCCTG AGCGGCGGCG GCGGCGCCGA CCTGTTCCGC
TTTTCGAGCC GCGAGGACAG CCACCGCACC GCCAGCGAAG GCTTCGCCGA CCGGATTCGC
GACTTCGACC CCGCCGAGGA CCGCATCGAC CTCTCGGCGC TCGGCTTCAG CGGCCTGGGC
GACGGTCGCA ACGGCACCCT GGCCGTGCAG GTGAACGGTG CCGGCACGCG CACCTACCTG
AAGAGCTTCG AGGCGGATGC CGAAGGCCGG CGCTTCGAGG TCGTCCTGGA CGGCGACTAC
GCGGGCCTGC TCGATGACGG CCAATTGATC TTCGCGCCGC CGCGCCTCGA AGGCAGCGCG
GCCGACGACG ATCTGATCGG CAGCGCGGCG GCGGAAATCC TCACCGGCGC GGACGGCGAC
GACCGCCTGC ACGGCGCCGG CGGCGACGAT CTGCTCGACG GCGGCGCCGG GCGCGACCGG
CTGACCGGTG GCAGCGGCGC CGACCTGTTC CGCATCGCCA ACCGCGAGGA CAGCCACCGC
ACCGCCAGCG AAAACCTCGC CGACCGGATT CGCGACTTCG ACCCCGACGA GGACCGCATC
GACCTCTCGG CGCTCGGCTT CAGCGGCCTG GGCGACGGCC ACGGCGGCAC TCTGCTGCTG
CAGGTGAGCG GCGAGCGCAC CTACCTGAAG AGCTTCGAGG CGGATGCCGA GGGACGGCGT
TTCGAGATCG CCCTGGACGG CGACCTCGCC GGCCGGCTCG ACAGCGGCAA TCTGCTCTTC
GCCGCCGCGC CCCTCGAAGG CAGCGCGGCC GACGACGATC TGATCGGCAG CGCGGCGGCG
GAAATCCTCA CCGGCGCGGA CGGCGACGAC TACCTGCACG GCGGTGCCGG CGACGACATC
CTCGACGGCG GCGCCGGACG CGATACCCTG GCCGGCGGCA GCGGCGCCGA TCTATTCCGC
TTCTCGGCCC GCGAGGACAG CCATCGCACC TCCGGCGAAA GCTTCGCCGA TCGGATCCTC
GACTTCGAGG CCGGTACGGA TCGCATCGAC CTCTCGGCGC TCGGCTTCAG CGGGCTGGGC
GACGGTCGCG ACGGTACCCT GGCCGTGCAG GTGAACGACA CCGGCACCCT CACCTACCTG
AAGAGCTTCG AGACGGATGC CGAGGGACGG CGTTTCGAGA TCGCCCTGGA GGGCGACTAC
GGCGGGCAGT TGTCCGCCGA CGCCATCCTC TTCGCCGCGC CCAACCAACT GGAAGTCATC
GGCAGCGTGC CGCCCGAACA GGTCGGCTGA
|
|---|
| Protein sequence | MNTSTLSGSV PNPTPRAATG KMLVDVGGHD DYSYAMGLQP DGGILLAGYS YDPGRRNYDT
SLVRLNADGT LDTGFGDLGK VVVDIGGSDG ARGLSLQADG KILLAGLSAN DFGAIRLNAD
GSLDTGFGVG GKVTVDIAGS YDQANALAVQ PDGKILLAGN GHNGANYDFS LIRLNADGSL
DTGFGNGGKA SFDDGGHEFG YGLALQADGK ILMVGQSGSD IGVIRLNADG SLDAGFGDGG
KAILDIGGEI DIGRSLSLLP DGKILVGGFS YDISGDYYHY NFSLIRLNAD GSLDTGFGDG
GTAIVDIAGG NDQGHSLVLQ DDGKILLAGF SYLPDRGAYD FSVIRLNADG SLDAGFGGDG
KVTVDIARGY DEGYSLAVQP DGRILLSGLG NNSASGRYDF SVIRLNADGT LDTNFGALDD
GVDLVEGSDG DDELLGDSAR ELLLGKDGDD RLDGGAGDDT LDGGAGRDSL SGGGGADLFR
FSSREDSHRT ASEGFADRIR DFDPAEDRID LSALGFSGLG DGRNGTLAVQ VNGAGTRTYL
KSFEADAEGR RFEVVLDGDY AGLLDDGQLI FAPPRLEGSA ADDDLIGSAA AEILTGADGD
DRLHGAGGDD LLDGGAGRDR LTGGSGADLF RIANREDSHR TASENLADRI RDFDPDEDRI
DLSALGFSGL GDGHGGTLLL QVSGERTYLK SFEADAEGRR FEIALDGDLA GRLDSGNLLF
AAAPLEGSAA DDDLIGSAAA EILTGADGDD YLHGGAGDDI LDGGAGRDTL AGGSGADLFR
FSAREDSHRT SGESFADRIL DFEAGTDRID LSALGFSGLG DGRDGTLAVQ VNDTGTLTYL
KSFETDAEGR RFEIALEGDY GGQLSADAIL FAAPNQLEVI GSVPPEQVG
|
|---|
| |