Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_49140 |
Symbol | |
ID | 7763772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4973310 |
End bp | 4975379 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643807753 |
Product | GGDEF domain protein |
Protein accession | YP_002801988 |
Protein GI | 226946915 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCCA GCCGCTACAA CGAAGTTCTC GTCGTTTTCT CCCTGATCGT CGCCATCCTC GCCTCCTACA CCGCCCTCGA CATCGCCGGC CGGGTTTCCA CGGCCCAGCG GGGCGCGCGG CTCGCCTGGC TGGCCGGCGG GGCGCTGGCC ATGGGAACGG GTATCTGGTC CATGCACTTC GTCGGCATGC TGGCGTTCAG CCTGCCGATC GAGCTCGGCT ACGACCTGTG GCTGACCAGC GCTTCCCTGC TGATCGCCAT CGCCTCGTCG ACCTTCGCCC TCTGGCTGGT CTGCCAGCGG GAACTACCCT GGCCGCGGCT GGCGATGGGC GCCTCGCTGA TGGGAGCCGG CATCGCCGCC ATGCACTACA CCGGCATGGA GGCCATGCGC ATGGTGCCGG GCATCGTCTA CGACCCGGCC TGGTTCGCCC TGTCGATCGT CGTCGCCGTG CTGGCCTCGG GCGCGGCGCT GTGGATCGCC TTCCGCCTGC GCTGGCATTC CACCTGGGTG GTCTTCAGTC GGGCCGGCGC ATCGGTGGCG ATGGGCTGCG CCATCGTCGG CATGCACTAC ACCGGCATGG CCGCCTCGCA GTTCCCGGAG GGCAGCTACT GCGGGGCGGC CAACAGCGGC ATCGACACCG GCTGGCTGTC GATCCTGGTG ATCATGGCGG CGCTCAGCGT GATGGCCACC ACACTGATCA TCTCGGTGCT GGACTCGCGC CTGGAACAGC GCACCGCGTC GCTGGCCAGC GCGCTCAGCA AGGCCAACAG CGAGCTGATG CAACTGGCGC TATACGACAA CCTGACCAAG TTGCCCAACC GCATGCTGCT CGCCGACCGC CTGGGTCAGG CGATCGAAAA GGCCCGCCGC GAACACAAGG TGTTCGCCGT ACTGTTCATC GACCTGGACG GCTTCAAGGC GATCAACGAC GCCTACGGCC ATCACCTCGG CGACCTGCTG CTGGTGGAGG TGACGCAGCG CATTCGCGGT AGCGTGCGCG GCCAGGACAC CATCGCCCGG CTGGGCGGCG ACGAACTCAT CCTGTTGACG GAAATCGGCG AACCGACGGA CGCGGCGAAG ATCGCCGGAA AACTGATCGA AACCATCCGC CAGCCCTATT CGATCGAGCA TCACGAACTA TTCGTCTCCG CCAGCGTCGG CATCGCCGTC TACCCCGACG ACGGGCTGGC CCCGCACGAA CTGCTGGTCA ACGCCGACGC GGCGATGTAC CACGCCAAGG AACAGGGCCG CGACGGCTAC TGCTTCTTCG AGAACTCGAT GAACGCCAAC GCCCAGGAGC AGTTGCGTCT GCTGCAGGAC CTGCGCCACG CCCTGGAACG CGACGAGCTG CGCCTGCACT ACCAGCCCAA GCTGATCGCC CCAGACGGGC CGATCATCGG GGTCGAGGCA CTGCTGCGCT GGCAGCATCC CGAACGCGGC CTGCTGTCGC CCGACCAATT CCTGCCGCTG GCGGAGAAAA CCGGCCTGAT CGTGCCGATC GGCAACTGGG TGCTCGACGA AGCCTGCGCG CAGATACAGC GCTGGCGCGC GGCGGGCCAT ACGAGCTGGA ACATCGCGGT GAACCTGTCG GCCAGCCAGT TCGCCCATGC CAAGCTGATC GACTCGGTGC GCACAGCCCT GCAGCGACAT GGCCTGGAAG CGCACAACCT GACCCTCGAA ATCACTGAAT CCACCGCCAT GCGCGATGCC GACTCCAGCC TGGCGGTACT CGAACAACTG GCGGCGATGG GGGTTGGCAT CTCCATCGAC GATTTCGGCA CCGGCTACTC CAGCCTGCTC TACCTCAAGC GCCTGCCGGC CAACGAGCTG AAGATCGACC GCGGCTTCGT CAACGAACTG GGCCAGGGCG GCGACGACGC GGCCATCGTC TCCGCGATCA TCGCTCTGGG CCGGACGCTG GGCCTGAAGA TCGTCGCCGA GGGCGTGGAA ACCCCCGAGC AGCAGAAACA CCTCACCCGG CTCGGCTGCA ACCTGCTGCA AGGCTATCTG CTCGGGCGGC CGATGCCGGC CGAACAGTTG ATCGAGTGCT ACGGAGAAAC GCCGGCGTAG
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Protein sequence | MLASRYNEVL VVFSLIVAIL ASYTALDIAG RVSTAQRGAR LAWLAGGALA MGTGIWSMHF VGMLAFSLPI ELGYDLWLTS ASLLIAIASS TFALWLVCQR ELPWPRLAMG ASLMGAGIAA MHYTGMEAMR MVPGIVYDPA WFALSIVVAV LASGAALWIA FRLRWHSTWV VFSRAGASVA MGCAIVGMHY TGMAASQFPE GSYCGAANSG IDTGWLSILV IMAALSVMAT TLIISVLDSR LEQRTASLAS ALSKANSELM QLALYDNLTK LPNRMLLADR LGQAIEKARR EHKVFAVLFI DLDGFKAIND AYGHHLGDLL LVEVTQRIRG SVRGQDTIAR LGGDELILLT EIGEPTDAAK IAGKLIETIR QPYSIEHHEL FVSASVGIAV YPDDGLAPHE LLVNADAAMY HAKEQGRDGY CFFENSMNAN AQEQLRLLQD LRHALERDEL RLHYQPKLIA PDGPIIGVEA LLRWQHPERG LLSPDQFLPL AEKTGLIVPI GNWVLDEACA QIQRWRAAGH TSWNIAVNLS ASQFAHAKLI DSVRTALQRH GLEAHNLTLE ITESTAMRDA DSSLAVLEQL AAMGVGISID DFGTGYSSLL YLKRLPANEL KIDRGFVNEL GQGGDDAAIV SAIIALGRTL GLKIVAEGVE TPEQQKHLTR LGCNLLQGYL LGRPMPAEQL IECYGETPA
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