Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_49060 |
Symbol | |
ID | 7763764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4965547 |
End bp | 4967208 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643807745 |
Product | cyclic di-GMP signal transduction protein |
Protein accession | YP_002801980 |
Protein GI | 226946907 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.60353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCGACA GCACCCTGGA GGGCGTGCTG GTCACCGATG CGAACCAGCG CATCGTCCAC ATCAACCGGG CCTTCACGCG GATCACCGGC TACACCGAAG CCGAGGTGCT CGGGCGAGCG CCCTCGCTCC TCAAGTCCGG TCGGCATGAC GAGGAGTTCT ACCGGAAGAT GTGGCAGGCG CTGGGCCAAC GTCTCGAATG GAACGGCGAG ATCTGGAACC GCCGCAAGAG CGGCGAGGTG TATCCGCAGT GGCAGAGCAT CCGCGCCATC CGCAACGAAG AAGGCGGCAT CAGCCACTAC GTGGCGGTGT TCTCCGACCT GTCGATGATC AAGCGCTCCC AGGCCGAACT CGACTACCTG GCCCATTACG ACCCGCTGAC CGGCCTGCCG AACCGGCTGC TGTTCAAGGA GCGCGTCCAG CACGCCCTGG AACGGGCCCG CCTGGAGAAG GGCCAGGGCG CGGTCCTGCT GCTCGACCTC GACCACTTCA AGCACGTCAA CGAAAGCCTC GGCCACAAGC TGGGCGACCA ACTGCTCAAG AGCGTCAGCC AGCAACTGAT CTACCACGTG GTGCGCCAGG GCATGACCTT CGCCCACCTG GGCGGCGACG AATTCGGCCT GCTCTGCGAG AACTGCTCGC CGCAGCAGGC CGCCACCCTG GCCACCACCC TCCTCGACAC GCTGAACCAG CCCATCTACC TGGAGCACCA CCGGCTGCTG ATCGGTGCCA GCCTCGGCAT CAGCCTGTTC CCCGGCGATG CGCAGAGCGT CGAGCAGGTG CTGCGCAACG CCGATTCCGC CCTGCACAAG GCCAAGAGCG ACGGGCGCGC CACCTACGCC TTCTACAGCC AGGAGTTGAC CGCCTACGCG CACCAGCGCG TCGAACTGAT CGCCGCCCTG CGCCATGCCC TGGAGCACGG CGAACTGCGC GTCCACTACC AGCCGATCCA CGACCTTCGC AGCGGGCAAC TGGTCAGCCT CGAAGCGCTG GTGCGCTGGC AGCATCCCGA GCGCGGCCTG GTGCCGCCCG GCGAGTTCAT CCCGGTCGCC GAGGAAAACG GTCTGATCGG CACCATCGAC CTCTGGGTGA TGGAGCAGGC CTGCCGGCAG ATGCGCAGAT GGCTGAAGGC CGGGCACAAG CTCCAGTTCG TCGCGGTGAA CGTCTCCACC CGCCTGTTCA GCCGTGGCCG GCTGGACCTG CAGGTCGCCG AGATCCTCGC CTGCAGCGGC CTGGAGGCGC GTCACCTGGA GCTGGAGATC ACCGAGAGCG CGGTGATGGA CGACCCGGAC AGCGCCCGTC GCCAGCTCCA GCGGCTGCGC GATCTGGGCG TGCGCCTGGC GATCGACGAC TTCGGCACCG GCCATTCCTC GCTGCAGCGC CTGAAAAGCA TGCCGGTGGA CAAGCTGAAG ATCGACCGCG GCTTCGTCGC CGGCCTGCCA TCCGACAGCA AGGACGCCGC CATTGCCCGC TCGGTGATAG TGCTCGCCCA GAGCCTGGGT CTGAGCGTGC TGGCCGAAGG CATCGAGCGG CCGGAGCAGG CGGAGTTCCT CGAACGCAAC CAGTGCTTCC TGGGCCAGGG CTATCTCTTC GGCCGGCCGC AACCGGCGGA GGAACTCTTC CGGACGGCGG CCGCGCTGCC GGCGAAGGCC CTGGCCGGCT GA
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Protein sequence | MFDSTLEGVL VTDANQRIVH INRAFTRITG YTEAEVLGRA PSLLKSGRHD EEFYRKMWQA LGQRLEWNGE IWNRRKSGEV YPQWQSIRAI RNEEGGISHY VAVFSDLSMI KRSQAELDYL AHYDPLTGLP NRLLFKERVQ HALERARLEK GQGAVLLLDL DHFKHVNESL GHKLGDQLLK SVSQQLIYHV VRQGMTFAHL GGDEFGLLCE NCSPQQAATL ATTLLDTLNQ PIYLEHHRLL IGASLGISLF PGDAQSVEQV LRNADSALHK AKSDGRATYA FYSQELTAYA HQRVELIAAL RHALEHGELR VHYQPIHDLR SGQLVSLEAL VRWQHPERGL VPPGEFIPVA EENGLIGTID LWVMEQACRQ MRRWLKAGHK LQFVAVNVST RLFSRGRLDL QVAEILACSG LEARHLELEI TESAVMDDPD SARRQLQRLR DLGVRLAIDD FGTGHSSLQR LKSMPVDKLK IDRGFVAGLP SDSKDAAIAR SVIVLAQSLG LSVLAEGIER PEQAEFLERN QCFLGQGYLF GRPQPAEELF RTAAALPAKA LAG
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