| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49020 |
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| Symbol | anfA |
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| ID | 7763760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4961738 |
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| End bp | 4963351 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643807741 |
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| Product | sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA |
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| Protein accession | YP_002801976 |
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| Protein GI | 226946903 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC AGGCAACCTT CGAGTTCGAC ACGGATTACT TCGTCGAGGA GTTCAGCCAC
TGCTTCACCG GCGAGTGCCG GGTGAAGATG CTCCCCATCC TGTACAAGAT CAGCCAGATC
ATTACCGGCA ATGCCGATCT GGCCGATGCC CTGTCCATCG TTCTGGGCGT CATGCAGCAG
CACCTGAAGA TGCAGCGCGG CATCGTCACG CTCTACGACA TGCGTGCCGA AACCATCTTC
ATCCACGATA GCTTCGGCTT GACGGAAGAG GAGAAGAAAC GCGGCATCTA CGCTGTCGGC
GAGGGCATCA CCGGCAAGGT GGTGGAAACG GGCAAGGCCA TTGTCGCCCG GCGTTTGCAG
GAGCATCCGG ACTTTCTGGG GCGCACCCGG GTATCCCGCA ACGGCAAGGC CAAGGCAGCG
TTTTTCTGTG TGCCCATCAT GCGTGCCCAG AAAGTGCTGG GCACCATCGC TGCGGAGCGG
GTTTACATGA ATCCGCGCCT GCTCAAGCAG GATGTCGAAC TGCTGACCAT GATCGCCACC
ATGATCGCTC CCCTGGTCGA GTTGTACCTG ATCGAGAACA TCGAAAGGGT GCGTCTGGAA
AACGAAAACC GTCGCCTGAA GCATGCGTTG AAGGAGCGTT TCAAGCCTTC CAACATCATC
GGCAATTCCA AGCCCATGCA GGAGGTGTAC GAACTGATTC ACAAGGTGGC CTCCACCAAG
GCCACGGTGC TGATCCTGGG GGAAAGCGGA GTCGGCAAGG AACTGGTGGC CAACGCCATC
CACTACAACA GCCCCAATGC CGAGGCTGCT CTCGTCACCT CCAACTGCGC GGCGCTGCCG
GAGAATCTGG CGGAAAGCGA ACTCTTCGGC CATGAAAAGG GCTCCTTTAC CGGAGCCTTG
ACCATGCACA AGGGCTGTTT CGAGCAGGCC GATGGCGGCA CCATCTTCCT GGACGAGGTC
GGCGAACTGA GCCCGACGGT CCAGGCCAAG CTGCTGCGGG TGCTGCAGAA CCGTACCTTC
GAGCGGGTAG GGGGCAGCAA GCCGGTCAAG GTGGATGTGC GCATCATCGC GGCGACCAAC
CGCAACCTGG TGGAAATGGT GGAGCAGGGC ACTTTTCGTG AAGACCTGTA TTACCGCCTC
AATGTCTTTC CCATTACCGT CCCGCCGTTA CGTGAGCGGG GCAGCGACGT CATCGCCCTG
GCAGATCACT TTGTCAGCGC CTTTTCCAGG GAGAACGGCA AGAACGTCAA GCGCATCTCC
ACGCCGGCGC TCAACATGTT GATGAGCTAT CACTGGCCGG GCAATGTCCG CGAACTGGAA
AACGTCATGG AGCGTGCGGT CATTCTGTCC GATGACGATG TGATCCATAG CTACAATCTG
CCCCCCTCCC TGCAGACCTC CAAAGAGAGC GGTACGGCCT TCGGGCTCAC CCTGGAGGAA
AAGATAAAGG CTGTCGAGTG CGAGATGATT GTGGAGGCCT TGAAAAACTC CAGCGGTCAC
ATAGGGGAGG CGGCCAAGGA GCTGGGTTTG ACGCGGCGCA TGCTTGGCGT ACGGATGGAG
CGTTATGGCA TCAGTTATAA AAGTTTTCGC GGTACGCATG ATACCGATGA GTGA
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| Protein sequence | MSDQATFEFD TDYFVEEFSH CFTGECRVKM LPILYKISQI ITGNADLADA LSIVLGVMQQ
HLKMQRGIVT LYDMRAETIF IHDSFGLTEE EKKRGIYAVG EGITGKVVET GKAIVARRLQ
EHPDFLGRTR VSRNGKAKAA FFCVPIMRAQ KVLGTIAAER VYMNPRLLKQ DVELLTMIAT
MIAPLVELYL IENIERVRLE NENRRLKHAL KERFKPSNII GNSKPMQEVY ELIHKVASTK
ATVLILGESG VGKELVANAI HYNSPNAEAA LVTSNCAALP ENLAESELFG HEKGSFTGAL
TMHKGCFEQA DGGTIFLDEV GELSPTVQAK LLRVLQNRTF ERVGGSKPVK VDVRIIAATN
RNLVEMVEQG TFREDLYYRL NVFPITVPPL RERGSDVIAL ADHFVSAFSR ENGKNVKRIS
TPALNMLMSY HWPGNVRELE NVMERAVILS DDDVIHSYNL PPSLQTSKES GTAFGLTLEE
KIKAVECEMI VEALKNSSGH IGEAAKELGL TRRMLGVRME RYGISYKSFR GTHDTDE
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