| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_48940 |
|---|
| Symbol | |
|---|
| ID | 7763753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4953517 |
|---|
| End bp | 4954740 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643807734 |
|---|
| Product | Fatty acid desaturase |
|---|
| Protein accession | YP_002801969 |
|---|
| Protein GI | 226946896 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGT TCAACTTCCG AGGTACACAA CGCATGTGGT ACGACGGTTT TCTCGATCCG
ACGCCCTGGC AGCTCATCAT GGTGACCTTG CTGATCACGC ATTTGACCGT GGTCAGCGTC
ACCGTGTACT TGCACCGTTA TTCGGCGCAT CGCGCGCTGG AGCTGCATCC GGCCGTGAAG
CACGCCTTCC GCTTCTGGCT GTGGCTGACC ACCGGCATGA ACACCCGCGA GTGGACCGCC
GTCCACCGCA AGCACCACGC CTGCTGCGAG ACGCCGGAGG ATCCGCACAG CCCCCGCTAC
AAGGGGCTGG CGAACGTCCT GTGGCGGGGC GCCGAACTGT ACAAGGCGGA AGCGGGCAAT
ACCGAGACGC TGCGCATCTA CGGCAAGAAC TGTCCGGACG ACTGGATCGA GCGACATGTC
TATTCGCGCT TCCCCAACGG CGGCGCGATG CTCATGCTGC TGATCGACCT GGCGTTGTTC
GGCGCGTTCG GCCTGAGCGT CTGGGCCGTG CAGATGCTGT GGATTCCGTT CTGGGCCGCC
GGCGTGGTCA ACGGCCTCGG CCATGCCGTG GGCTATCGCA ATTTCGAATG CCGCGACGCC
GCCACCAATC TGGTGCCCTG GGGCATCCTG ATCGGCGGCG AGGAACTGCA CAACAACCAC
CATACCTATC CCGGTTCGGC CAAGTTGTCG GTACGCCCCT GGGAATTCGA CATGGGCTGG
GCCTGGATTC GCCTGCTGGT CCTGCTGGGG CTCGCCGAGG TCAAGCGCAC CGTGCCGGTC
GCCCACCGGG TGGCGGACAA GCGTCATCTG GACATGGACA CCGCCAGGGC GATTCTCAAC
AACCGCTTCC AGATCATGGC GCACTACCGT AGCCGGGTGA TCGCCCCGCA GGTGCGCATG
GAGGCGGCCC GGGCCGAGGC CTCGGTGCGT CACCTGTTCC ACCGGGCCAA GGGCCTGCTG
GCGCGCGAGA GCAGCCTGCT CGAGGCGCGC CAGCAGGCGC GCATCCAGTC GCTCCTCGAA
CAGAGCCAGA CGCTCCGGGT GGTCTACGAA CGACGCCTGG CGCTGCAGCA GGTCTGGACC
CGGACCAGCG CCAACGGCCA TGAGATGCTC GCCGCGATCC GGGCCTGGGT GCACGAGGCG
GAGGCCAGCG GCATCCAGTC CCTGTGCGAG TTCGCCGAAC ACCTGAAGAC CTACTCGCTG
CGTCCCGCCC CGAGCCTCGC CTGA
|
|---|
| Protein sequence | MPLFNFRGTQ RMWYDGFLDP TPWQLIMVTL LITHLTVVSV TVYLHRYSAH RALELHPAVK
HAFRFWLWLT TGMNTREWTA VHRKHHACCE TPEDPHSPRY KGLANVLWRG AELYKAEAGN
TETLRIYGKN CPDDWIERHV YSRFPNGGAM LMLLIDLALF GAFGLSVWAV QMLWIPFWAA
GVVNGLGHAV GYRNFECRDA ATNLVPWGIL IGGEELHNNH HTYPGSAKLS VRPWEFDMGW
AWIRLLVLLG LAEVKRTVPV AHRVADKRHL DMDTARAILN NRFQIMAHYR SRVIAPQVRM
EAARAEASVR HLFHRAKGLL ARESSLLEAR QQARIQSLLE QSQTLRVVYE RRLALQQVWT
RTSANGHEML AAIRAWVHEA EASGIQSLCE FAEHLKTYSL RPAPSLA
|
|---|
| |