Gene Avin_48900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48900 
Symbol 
ID7763749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4949681 
End bp4950799 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content72% 
IMG OID643807730 
Productagmatine deiminase 
Protein accessionYP_002801965 
Protein GI226946892 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID[TIGR03380] agmatine deiminase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0724155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAAC CGATGCGAAC CCTGAGCGGC ACGCCGCGCG CCGATGGCTT CCGCATGCCC 
GCCGAGTGGG AGCCGCACGC CCAGACCTGG ATGCTCTGGC CGGAACGCCC GGACAACTGG
CGGCTCGGCG GCAAGCCGGC GCAGGCCGCC TTCGCCACGG TGGCCCGCGC CATCGCCCGC
TTCGAGCCGG TGACCGTCGG CGTCTCGGCG GCGCAGTACG AGAACGCCTG CGTCCGCCTC
GCCGGCGCCG ACATCCGGGT GGTCGAACTG AGCAGCGACG ACGCCTGGGT ACGCGACACC
GGACCGACCT TCCTGGTCGA CGACGCCGGC GAGGTGCGCG GCGTGGACTG GACCTTCAAC
GCCTGGGGCG GCTTCGCCGG CGGCCTGTAC GCGCCCTGGA ACCGCGACGA CCAGGTGGCG
CGCAAGATCC TCGGTATCGA GCGCTGCGCC CGCTACCGCA CCGAAGGCTT CGTGCTGGAA
GGCGGCGCCA TCCACGTCGA CGGCGAGGGC ACCCTGCTCA CCACCGAGGA ATGCCTGCTC
AACCCGAACC GCAACCCGCA CCTCTCGCGC GAGGAGATCG AGGCCGTGCT CGCCGGGCAC
CTGGCCGTCG AACGGGTGAT CTGGCTGCCG CAGGGGCTGT ACAACGACGA GACCGACGGC
CATGTCGACA ACTTCTGCTG CTTCGTGCGT CCCGGCGAGG TGCTGCTGGC CTGGACCGAT
GACCCGCAGG ACCCCAACCA CCCGCGCTGC CGGGCGGCGC TGGAGGTGCT CGAGCGGGTC
CGCGACGCCC GCGGCCGGGC CCTGCGCGTG CAGCGGATGC CGATACCAGG TCCGCTGCAC
GCCAGCGCGG AGGAATGCGC CGGCGTCGAC CCGGCCGCCG ACAGCCAGCC GCGCGATCCG
TCGATCCGCC TGGCCGCCTC CTACGTGAAT TTCCTGATCG TCAACGGCGG CATCATCGCG
CCGGCCTTCG ACGATCCGCG CGACGCCGAG GCCGAGGCCC TTCTCCGGCA GTCGTTCCCC
GGGCGCGAGG TGTTGATGCT ACCCGGCCGC GAGATTCTCC TCGGCGGCGG CAACATCCAC
TGCATCACCC AGCAGCAGCC GGCCGCACGA CGGCGCTGA
 
Protein sequence
MPEPMRTLSG TPRADGFRMP AEWEPHAQTW MLWPERPDNW RLGGKPAQAA FATVARAIAR 
FEPVTVGVSA AQYENACVRL AGADIRVVEL SSDDAWVRDT GPTFLVDDAG EVRGVDWTFN
AWGGFAGGLY APWNRDDQVA RKILGIERCA RYRTEGFVLE GGAIHVDGEG TLLTTEECLL
NPNRNPHLSR EEIEAVLAGH LAVERVIWLP QGLYNDETDG HVDNFCCFVR PGEVLLAWTD
DPQDPNHPRC RAALEVLERV RDARGRALRV QRMPIPGPLH ASAEECAGVD PAADSQPRDP
SIRLAASYVN FLIVNGGIIA PAFDDPRDAE AEALLRQSFP GREVLMLPGR EILLGGGNIH
CITQQQPAAR RR