Gene Avin_48770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48770 
Symbol 
ID7763736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4938413 
End bp4939156 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content43% 
IMG OID643807717 
Producthypothetical protein 
Protein accessionYP_002801952 
Protein GI226946879 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCGAA AAAAATTTAT AGAAGCGCAA GGCGCAACTT GCAGGAACTG GACATGGAGC 
TGGTCATTCA TCAATGAGGG CAAGAAAGTC ATCATATTTG GTGCTTGGGA CACAAATACT
GATGGTGATA CGTCACTCAT TTTGAGTGAT ACATGGGAGT ACAGCGAAAG AGGAAGGAAG
CAGCCTGCGT ATGAACAATC GAGAGAACAT ATCCGGCTAA TTGAGGAAGA AGGATATGAG
TTACAGACAT TCCCAATTAT CTACTCAGGC GCAAACAAGG ATAAGAATGG GATTGGTCCT
GCAAAGATAG AAGGTTTTAT TCCTGAGCTA TCGAGTAAGA TTTTGAAACG AGTCGGAGGT
AAATGGTATG CTTCTGATGG TGGAATGGGG AATCAACTGG CTGAGGAAAT AGATACACCT
GAGAACTATA TAGAGGGTGC ATCTAAAATG GTTTCAGTTA ATACCTATGA GCGAAGCGCC
GATGCACGAG CTAAGTGTGT TGCTCGCTAC GGCTATAGCT GTTCTGTATG CGGTTTTGAT
TTTGAGGCTG TGTATGGAGA AATCGGACAG AAATATATTC ATGTGCATCA TATAGTGCCA
CTTGCTGAGA TTGCAAAAGA GTATGTGCTT GATCCAGTAA AGGATCTGAT CCCAGTTTGT
GCCAATTGCC ATGCAATCAT ACATCGTACC CGTCCAGCTT TAACGATTGA GCAGCTTAAG
GCGCATTTGG CCAAAAGTGA GTAA
 
Protein sequence
MSRKKFIEAQ GATCRNWTWS WSFINEGKKV IIFGAWDTNT DGDTSLILSD TWEYSERGRK 
QPAYEQSREH IRLIEEEGYE LQTFPIIYSG ANKDKNGIGP AKIEGFIPEL SSKILKRVGG
KWYASDGGMG NQLAEEIDTP ENYIEGASKM VSVNTYERSA DARAKCVARY GYSCSVCGFD
FEAVYGEIGQ KYIHVHHIVP LAEIAKEYVL DPVKDLIPVC ANCHAIIHRT RPALTIEQLK
AHLAKSE