Gene Avin_48730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48730 
SymbolpotI 
ID7763732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4933698 
End bp4934567 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID643807713 
Productpolyamine transport protein PotI 
Protein accessionYP_002801948 
Protein GI226946875 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.907578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGCC CGAGCTTTTC CAGCCTGATG CTCTGGGCTG GCCTGCTGTT CATCTACCTG 
CCGATGATCA TTCTGGTCGT CTATTCCTTC AACGACTCGC GGCTGGTGAC CGTGTGGGGC
GGCTGGTCGC TGCGCTGGTA CGCCGGGTTG CTCGACAACC GGCAACTGCT GGGCGCGCTC
GGGCGCTCCC TGCAGGTCGC CCTGTGCAGC GCGGTCGCCG CGGTGGCCCT CGGCACCCTG
GCGGCCTTTG TGCTGACCCG CATCCCGCGC TTTCGCGGGC GCAGCCTGTT CGGCGGGCTG
GTCACCGCGC CGCTGGTGAT GCCCGAGGTG ATCACCGGCC TGTCGCTGCT GCTGCTGTTC
GTGGCCATGG CCCAAGTGGT CGGCTGGCCG GCCGAGCGCG GCCTGACCAC CATCTGGATC
GCCCACACCA CCTTCTGCAC TTCCTACGTG GCGGTCATCG TCTCGGCGCG CCTGCGCGAG
CTGGACCTGT CGATCGAGGA GGCGGCGATG GACCTGGGCG CGCGGCCCTG GAAGGTGTTC
CTGCTGATCA CCCTGCCGAT GATCGCCCCC TCGCTGGGCG CCGGCGGCAT GCTGTCCTTC
GCCCTGTCGC TGGACGACCT GGTGCTGGCC AGCTTCGTCT CCGGCCCCGG CGCGACCACC
CTGCCGATGG AGATCTTCTC GGCCGTGCGC CTGGGCGTGA AGCCGGACAT CAACGCCGTG
GCCAGCCTGA TCCTGCTGGC GGTGTCGCTG TTCACCTTCC TCGCCTGGTT CTTCATGCGC
CGCGGCGAGG CCCGCCGGCG GCGGGCCCTG CAGCAGATCC ACGAGGACGA GAAGCGCCAG
CCGTCCTGGC AGTCGGCCGG CCGGGCCTAG
 
Protein sequence
MRRPSFSSLM LWAGLLFIYL PMIILVVYSF NDSRLVTVWG GWSLRWYAGL LDNRQLLGAL 
GRSLQVALCS AVAAVALGTL AAFVLTRIPR FRGRSLFGGL VTAPLVMPEV ITGLSLLLLF
VAMAQVVGWP AERGLTTIWI AHTTFCTSYV AVIVSARLRE LDLSIEEAAM DLGARPWKVF
LLITLPMIAP SLGAGGMLSF ALSLDDLVLA SFVSGPGATT LPMEIFSAVR LGVKPDINAV
ASLILLAVSL FTFLAWFFMR RGEARRRRAL QQIHEDEKRQ PSWQSAGRA