Gene Avin_48420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48420 
Symbol 
ID7763702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4904843 
End bp4905703 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content74% 
IMG OID643807684 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_002801919 
Protein GI226946846 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.727055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCA CTGCGCCCGT GCTGCTGATC GCCGGTTGCG GCGACGTCGG CAGCCGCCTC 
GGCGAACGGC TGGCCGCCGC CGGCTGGCAT GTGCATGGCC TGCGCCGGCG GGTGGCCGCC
CTGCCGGCGA CGATCCTGCC GCTGTGCGGC GATCTCGAAA GCACGCAGTG TCCTGCGGGC
TGGCCGCCGG GGCGGATCGA TTACCTGATC TACAGCGCGG CGGCCAGCCG TCACGACGAG
CCCGGCTACC GGGCCGCCTA TGTCCAGGGG TTGTGCCATG TGCTGGACTG GCTGACGCGG
CACGGCCAGA AGCCGAGGCG GCTGCTGTTC GTCTCCAGCA CCGGGGTCTA CGGCCAGCAG
GAGGGCGAGT GGGTCGACGA AAACTCGCCG ACCGAGCCTT CCGGTTTCTC CGGGCGGGTG
CTGCTGGAGG CCGAACGCCT GGCCCTGGGC AGCGGCCTGC CGGCCAGCGT GGTGCGTCTG
GCCGGCATCT ACGGGCCCGG TCGCGAGTGG CTGCTCGGGC AGGTCCGCCG CGGCGGTCGG
ATCGCCGCGA CGCCGCCGCT CTACGGCAAC CGCATCCACC GCGACGACGC CGCCGGACTG
CTCACCTTCC TGCTCGAGGC CGATGCCCGT GGCGTTCCGC TGGCCGACTG CTATCTGGGC
GTGGACGACG CGCCGGCGCC GCTGCACGAG GTGGTCGCCT GGCTGCGCGG GTGGCTGGGC
GTGACCGGCG AGGGCCCGGA GAGCATCGGT CGGCGCGCCG GCAGCAAGCG TTGCAGCAAC
GCCAGGGCCC GCGCGCTCGG CTGGGTGCCG CGCTATCCCG GTTACCGCGA GGGCTATGCG
GCGCTGCTGG ACACGCCCTA G
 
Protein sequence
METTAPVLLI AGCGDVGSRL GERLAAAGWH VHGLRRRVAA LPATILPLCG DLESTQCPAG 
WPPGRIDYLI YSAAASRHDE PGYRAAYVQG LCHVLDWLTR HGQKPRRLLF VSSTGVYGQQ
EGEWVDENSP TEPSGFSGRV LLEAERLALG SGLPASVVRL AGIYGPGREW LLGQVRRGGR
IAATPPLYGN RIHRDDAAGL LTFLLEADAR GVPLADCYLG VDDAPAPLHE VVAWLRGWLG
VTGEGPESIG RRAGSKRCSN ARARALGWVP RYPGYREGYA ALLDTP