Gene Avin_48400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48400 
Symbol 
ID7763700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4903250 
End bp4904188 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID643807682 
Producthypothetical protein 
Protein accessionYP_002801917 
Protein GI226946844 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00598917 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGT CCTTCCAGCC CGATCTTCTG CGTCCTTTGC TGCAGCCTTT GGCCACGGCC 
GGCGACGAGT CGCCGCGGGT CCGGGCCTAC CGCCGCTACT ACGGGCTCGA CTTGGGCGAG
CATCGGCCGG GCGTGCAGGG CCGCCTCGGC GCCTTCGACG TCGGTCCCTA CCGGATCGTC
GCCCAGGTCT GGTGGCCGGA GCGGCCGCGC GCGACCCTGC TGCTGTTGCA CGGCTACTAC
GATCACATGG GACTCTACCG GCACGTGCTC GACTGGGCGC TGGGCATGGG CTTCGCCGTG
CTCTCCTGCG ACCTGCCGGG GCACGGGTTG TCCAGCGGCG CGCCGGCCAG CATCGACGAC
TTCGCCGAAT ACCAGGCGGT GTTCCAGGGG CTTCTGGGCG AGGCCGCCGC GCTCGATTTG
CCCAAGCCCT GGCACCTGTT CGGGCAGAGC ACCGGCGGCG CCATCCTGCT CGATTATCTG
CTGACCGGCG CGCCGCGCCC CGAGCTGGGC GAGACCATCC TCTTCGCCCC GCTGGTGCGG
CCGCGCAGTT GGCGGCTGTC GAAGCTCAGT TACCAGGCGC TGCGGCCGTT CGTCCAGTCG
ATTCCGCGGC GTTTCACCGA CAACTCCAGC GACGCGGCCT TTCTCGAATT CATCCAGCGC
GACCCGCTGC AGGCGCGCAT CCTGCCGACC GCCTGGGTCG GCGCGCTGGC GCGCTGGATT
CCGCGCATCG AGGCCGCCGG GCGCAGCGAG CGCAGCCCGC TGATCATCCA GGGCGATGCG
GACCTGACCG TCGACTGGCG GCACAACCTG GACGTCCTGC GGGGCAAGTT CCGCGATCCG
CAGTTCCTGC TGCTGGCGGA CGCGCGCCAT CACCTGGCCA ACGAGCGCGA GGCGCTGCGC
GAGCGCTACT TCGATTTTCT GCGCGAACGG CTGGCGTGA
 
Protein sequence
MSESFQPDLL RPLLQPLATA GDESPRVRAY RRYYGLDLGE HRPGVQGRLG AFDVGPYRIV 
AQVWWPERPR ATLLLLHGYY DHMGLYRHVL DWALGMGFAV LSCDLPGHGL SSGAPASIDD
FAEYQAVFQG LLGEAAALDL PKPWHLFGQS TGGAILLDYL LTGAPRPELG ETILFAPLVR
PRSWRLSKLS YQALRPFVQS IPRRFTDNSS DAAFLEFIQR DPLQARILPT AWVGALARWI
PRIEAAGRSE RSPLIIQGDA DLTVDWRHNL DVLRGKFRDP QFLLLADARH HLANEREALR
ERYFDFLRER LA