Gene Avin_48340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48340 
Symbol 
ID7763695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4898813 
End bp4899712 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID643807677 
ProductAuxin Efflux Carrier family protein 
Protein accessionYP_002801912 
Protein GI226946839 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.378131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGTGC TGCAGGCGAT TCTGCCGATC TTCGCCCTGA TCGTGCTGGG CTACCTTCTC 
GGGCGCCGTC AGTGGCTGGG TGCCCAGGCG GCCAGGGAAC TGGGCAACCT GACCTTCAAG
CTGTTCATGC CGATGCTGCT GTTCCATGGC ATCGCCAAGG CCTCGCTGGA CGAGGGCTTT
TCCCCCGGCC TGCTGCTGGC CTATTTCCTG CCGGCCCTGG GCGTCTTCGC CGTGGTGAAC
CTGATCGGCC ACCGCCTGCG CGGACGGCCC ACGCCGTTCG GCCTGACCGC CGGCTTCTCC
AACAACGTGC TGGTGGGCAT CCCGCTGGTC GCCAGCCTGT TCGGCAATCC CGGGCTGGTC
TACGTGTTCA CGGTGCTGGC CTTCCACAGC CTGCTGCTGT TTTCCTTCCA GAGCCTGTAC
GGCGCGCTGG CCGACGGGGA GGCGGTGAAT GTCCGCTCCC TGCTGCTGAG CCTGGCCAAC
CCGATGATCG TCGGGCTGGT GCTGGGCGTG CTGCTGAACC TCTCCGGCCT GCAACTGCCC
GTCTCCGTCG AGCATCTGGT CCAGTGGCTG GGACAGGCGG CGCTGCCCTG CGCGCTGATC
GTGCTCGGGG TCAATCTCTC CGGCTATCGT CTGTTCCCCA GCCGCGAGGC GCTCGGCATC
GTCTTCGCCA AGCTGCTGGT GTTCCCGCTG GCGGTACTGC TCCTGTGCGC GGCGCTCGGG
CTAGGGCCGC TGGCCAGTTC GGTGCTGATC GCCATGGCCG CCTGCCCCAG CGGGGTGAAC
GTGTTCGGCT TCGTCCGCCA TCCGGAGGAC AGCGGGGTGG TCAGCTCGGC GATCACCCTG
TCGACCCTGC TGGCGGTGCT GACCCTGCCG CTGTGGGTGT TTCTCGGCGC GCATCTGTAG
 
Protein sequence
MAVLQAILPI FALIVLGYLL GRRQWLGAQA ARELGNLTFK LFMPMLLFHG IAKASLDEGF 
SPGLLLAYFL PALGVFAVVN LIGHRLRGRP TPFGLTAGFS NNVLVGIPLV ASLFGNPGLV
YVFTVLAFHS LLLFSFQSLY GALADGEAVN VRSLLLSLAN PMIVGLVLGV LLNLSGLQLP
VSVEHLVQWL GQAALPCALI VLGVNLSGYR LFPSREALGI VFAKLLVFPL AVLLLCAALG
LGPLASSVLI AMAACPSGVN VFGFVRHPED SGVVSSAITL STLLAVLTLP LWVFLGAHL