| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_48220 |
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| Symbol | |
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| ID | 7763683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4886307 |
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| End bp | 4887341 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643807665 |
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| Product | cyclic di-GMP signal transduction protein |
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| Protein accession | YP_002801900 |
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| Protein GI | 226946827 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.590583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACC TCAAGGTTAG CGACAGCGTC TATGGTGCGA CTCACGAGGC CATCGCGCGG
ACCTTGCGTT TCGCGCTGGA AATCGTCAGC GACGGCATCT GGGACTGGGA CATCCGCACC
GACCACGTCA AGCGCAGTCC GGGCTGGTAT TCCATGCTCG GTTACGCCGT GGACAGCCTG
CCGGAGAACG TCCTGACCTG GCACCAGGTG ATCCACCCGG AAGACTTCGA GCGGGTCATG
CGCGGCTTCC GGGCCTATCT GGACGGGACG CACCCCGTCT ACGCAGAGGA ATACCGCTGC
CGCTGCCGCA ACGGCGACTA CCTGTGGATC AGCGATCACG GCCGTTTCGT CGAGTTCGAC
AAAGAGGGGC GGGCGACCCG GATGATCGGC GCGCACCGCA ACATACACGA GCGCAAGCTG
GCCGAGCTGG CCCTGCAGCG CAAGAATCAG GAACTGCTGG CGCTCAACCA GGCCCTCGAA
GACCTGGTGG CGGCGCGCAC CGAAGCCTTG CGCCGGGCAA ACCGGGCCCT GGCCGAGCAG
GCCGCACAGG CCCTGCGTCT CAGCGAGATC GACCCGCTTA CCCAGATCGC CAACCGCCGC
TGCCTCGAAA GGCAACTGCA GGTCGAATGG CATCGCCTGC AACGCCATGG CCATCCCTGT
GCACTACTGA TGTTCGACCT CGACCATTTC AAGCGGATCA ACGATGGTTT CGGTCACCAG
GCCGGGGACC GGGTGCTGGT CGCGGTCGCG CAGGCGGTGC GCCAGGATCT GCGGGACGTG
GATTGCTTCG CCCGCTGGGG CGGCGAGGAG TTCATCGTGT TGCTGCCGGA AACCGATGCG
GCGGCGGCCG GGTCGCTGGC GGAGCGCCTG CGCCTGAACC TGCGGCGGAT CGATGTCGCT
TTGCCGATGC CGCTCACCGC CAGTTTCGCC GTGGCGCAGA TGGTCGCGGA CGAGGCGCCG
GGCGACCTGG TGCGCCGCCT GGATGCGGCG CTCTACCAGG CCAAGCGGCA GCGGGACTGC
ATCGTGGTCA GTTAG
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| Protein sequence | MDDLKVSDSV YGATHEAIAR TLRFALEIVS DGIWDWDIRT DHVKRSPGWY SMLGYAVDSL
PENVLTWHQV IHPEDFERVM RGFRAYLDGT HPVYAEEYRC RCRNGDYLWI SDHGRFVEFD
KEGRATRMIG AHRNIHERKL AELALQRKNQ ELLALNQALE DLVAARTEAL RRANRALAEQ
AAQALRLSEI DPLTQIANRR CLERQLQVEW HRLQRHGHPC ALLMFDLDHF KRINDGFGHQ
AGDRVLVAVA QAVRQDLRDV DCFARWGGEE FIVLLPETDA AAAGSLAERL RLNLRRIDVA
LPMPLTASFA VAQMVADEAP GDLVRRLDAA LYQAKRQRDC IVVS
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