Gene Avin_48170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48170 
SymbolthyA 
ID7763679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4882933 
End bp4883727 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID643807661 
Productthymidylate synthase 
Protein accessionYP_002801896 
Protein GI226946823 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT ACCTCGACCT GATGCGCCTG GTGCGCGAGC ACGGCACCTT CAAGAGCGAC 
CGCACCGGCA CCGGCACGTT TTCCGTGTTC GGCCACCAGA TGCGCTTCGA CCTGGCCGAG
GGCTTCCCGC TGGTCACCAC CAAGAAGTGC CACCTCAAAT CCATCGTCCA CGAGCTGCTG
TGGTTCCTGA AGGGCGACAC CAACATCCGC TACCTGAAGG AAAACGGCGT GTCGATCTGG
GACGAGTGGG CCGACGGGAA CGGCGACCTC GGCCCGGTCT ACGGCTACCA GTGGCGCAGT
TGGCCGGCAC CGGACGGCCG GCACATCGAC CAGATAGCCA ATGTCGTGAA CATGATCCGC
GACAACCCGG ATTCGCGCCG GCTGATCGTC TCGGCCTGGA ACCCGGCGCT GATCGACGAG
ATGAAGCTGC CGCCGTGCCA TGCGCTGTTC CAGTTCTACG TGGCCGATGG CCGGCTCAGC
TGCCAGCTCT ATCAGCGCTC GGCGGACATC TTCCTCGGCG TGCCCTTCAA CATCGCCAGC
TACGCGCTGC TGATCCTGAT GATGGCGCAG GTCACGGGCC TCGCGCCCGG CGAGTTCGTC
TGGACCGGCG GCGACTGCCA CCTCTACGCC AACCACTTGG AGCAGGCCGA CCTGCAGCTC
TCCCGCGAAC CGCTGCCGCT GCCGACCATG CAGCTCGACC CCGACGTGAA GGACCTGTTC
GCCTTCCGCT TCGAGGACTT CGAGCTGGTC GGCTACCAGT CCCATCCGCA CATCAAGGCG
CCGGTGGCGA TCTGA
 
Protein sequence
MKQYLDLMRL VREHGTFKSD RTGTGTFSVF GHQMRFDLAE GFPLVTTKKC HLKSIVHELL 
WFLKGDTNIR YLKENGVSIW DEWADGNGDL GPVYGYQWRS WPAPDGRHID QIANVVNMIR
DNPDSRRLIV SAWNPALIDE MKLPPCHALF QFYVADGRLS CQLYQRSADI FLGVPFNIAS
YALLILMMAQ VTGLAPGEFV WTGGDCHLYA NHLEQADLQL SREPLPLPTM QLDPDVKDLF
AFRFEDFELV GYQSHPHIKA PVAI