Gene Avin_48100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48100 
SymbolftsY 
ID7763672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4874148 
End bp4875503 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content70% 
IMG OID643807654 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_002801889 
Protein GI226946816 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0287334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTT CAAACGACGA CAAGAAGCCG GCCGAGGCCG GAGAGAAGAA AGGCCTGTTC 
GGCTGGTTCC GCAAGAAGGA GCAGGCCACA CCGGCGCCCG CTCCCGAGGC AGAGGTCCCC
GCGCTCGGCA GCGAACCGCC GCGGGCCGTC GAGACCCCGG AGGCGGTCGA GCCGCAGCCG
CCTGTCACCG AAGCACCGCC GGCGACCGTC GAGGCGTTCC CCCTGGACGC TGTGGTGGAG
TCGACCGATG TGCCGTCCGC GCCGCCGCCA GCGGCTGAAG CGGCCATCGC CGAGGCCGAG
GAGGAGGCGG TCTTCTCTAG CCGCTGGCGC GGCGCCGCCC ACGGCGCGCC GACGCCCGAG
CCGGAGCGGC CCGTCGAGGC CGAGACGTCG GTTCCGCTTG CCCAGCCCGC GCCGCGGCCG
AACAAGTCCG GCTTCTTCGC CCGTCTCCGC CAGGGGCTGG CCAAGACCGG CTCGACCCTC
GGCGAGGGCA TGGCCAGTCT GTTCCTCGGC GAGAAGGCGA TCGACGACGA ACTGCTGGAA
GAGCTGGAGA CCCGCCTGTT GCTCGCCGAC GTCGGCGTCG AGGCGACCAC CGCGATCATC
CAGAGTCTGA CCCAACGGGT GGCGCGCAAG GAGCTGGCCG ACAGCGAAGC GCTGTACCGT
GCCCTGCAAG AGGAACTGGC CGCGCTGCTC AGGCCGGTCG AGCAGCCGCT GGTACTCGAA
TCCGAACAGC GGCCCTATGT GATCCTGGTG GTCGGCGTCA ACGGCGTCGG CAAGACCACC
ACCATCGGCA AGCTGGCCGC GCGCCTGCAG CAGGAGGGCA GAAAGGTCAT GCTCGCCGCC
GGCGACACCT TCCGCGCCGC CGCCGTCGAG CAGTTGCAGA TATGGGGCGA ACGCAACCGG
ATTCCAGTGA TCGCCCAGCA CACCGGCGCG GATTCCGCTT CGGTGATCTT CGACGCCCTG
CAGGCCGCCA AGGCGCGCGG CATGGATGTG CTGATCGCCG ACACCGCCGG CCGCCTGCAC
ACCAAGGACA ATCTCATGGA GGAGTTGAAG AAGGTCCGCC GGGTGCTCGG CAAGCTGGAC
GAGGCGGCGC CCCACGAAGT GCTGCTGGTG CTGGATGCCG GTACCGGGCA GAACGCCATC
AACCAGACGA AGCAGTTCAA CCAGGCGGTG GAGATCACCG GCCTCGCGCT GACCAAGCTG
GACGGCACCG CCAAGGGCGG GGTGATCTTC GCCCTGGCCA GGCAGTTCGG CCTGCCGATC
CGCTACATCG GGGTCGGCGA GGGCGTCGAC GATCTGCGCG ACTTCGCTGC CGAGGAGTTC
GTCCGCGCGC TGTTCGCGGA GAAGCCGGCG CAATGA
 
Protein sequence
MFGSNDDKKP AEAGEKKGLF GWFRKKEQAT PAPAPEAEVP ALGSEPPRAV ETPEAVEPQP 
PVTEAPPATV EAFPLDAVVE STDVPSAPPP AAEAAIAEAE EEAVFSSRWR GAAHGAPTPE
PERPVEAETS VPLAQPAPRP NKSGFFARLR QGLAKTGSTL GEGMASLFLG EKAIDDELLE
ELETRLLLAD VGVEATTAII QSLTQRVARK ELADSEALYR ALQEELAALL RPVEQPLVLE
SEQRPYVILV VGVNGVGKTT TIGKLAARLQ QEGRKVMLAA GDTFRAAAVE QLQIWGERNR
IPVIAQHTGA DSASVIFDAL QAAKARGMDV LIADTAGRLH TKDNLMEELK KVRRVLGKLD
EAAPHEVLLV LDAGTGQNAI NQTKQFNQAV EITGLALTKL DGTAKGGVIF ALARQFGLPI
RYIGVGEGVD DLRDFAAEEF VRALFAEKPA Q