| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_48010 |
|---|
| Symbol | |
|---|
| ID | 7763663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4864995 |
|---|
| End bp | 4866311 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643807645 |
|---|
| Product | D-amino acid oxidoreductase family protein |
|---|
| Protein accession | YP_002801880 |
|---|
| Protein GI | 226946807 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG CATTGCCGGG CACGTCCGCC GCCGACGACG GACACGCGCC CTCCTACTAC
GCCGCCACGA CCGGGCCGCG ACCGGAGTTT CCCGCCCTGG AAGGCGAACT GCAGGCCGAT
GTCTGCGTGG TCGGCGGCGG CTTCAGCGGC ATCAACACCG CCCTCGAACT GGCCGAGCGC
GGCCTCTCGG TGATCCTGCT GGAGGCCCGC GTGCTCGGCT GGGGTGCCAG CGGACGCAAC
GGCGGACAAC TGATCCGCGG CTTCGGCCAC GACCTCGAAC GCTTCCGTCC GCTGCTCGGC
GCGGACGGCG TCCGTGCCCT GAAGCTGCTG GGCCTGGAGT CGCTGGAGAT CGTCCGCCGG
CGGATCGAGC GCCATGCCAT CGACTGCGAC CTGACCTGGG GCTACTGCGA GCTGGCCACC
CGGGCGCGGC ACCTCGAGCA TCTGAAGGCC GAATGCGCCG AACTGCAGGC CCTCGGCTAC
CGCCACGAGC TACGCCTTCT GGAGGCCGAG CAGATGCACG AGGCGATCGG CTCGCGGCGC
TACCGCGGCG GCCTGCTGGA CCGTGGTTCG GGCCACCTGC ACCCGCTCAG GCTGCTGCTC
GGCGAAGCCG CCGTGGCGCG CTCGCTCGGC GTGCGCCTGT TCGAGCGCTC GGCGGCGCTC
CGGATCGATC ACGGCCAGGA AGTCTGCGTG CACACCGCTG GCGGCCGGGT CCGTGCCGCC
AGCCTGGTGC TCGCCGGCAA CGCGCATATC GGCGACCTGG AGCCGGAACT GGCCGGCAAG
GTGCTGCCGG CCGGCAGCTA TATCATCGCC ACCGAGCCGC TCTCCCCCAC CCTGGCCGCC
GAGTTGCTGC CGCAGAACCT GGCGGTCAGC GACATGCGCG TGGTGCTCGA CTACTTCCGC
CTGTCGGCCG ACCGCCGCCT GCTGTTCGGC GGCGCCTGCC ACTATTCGGG GCGCGATCCG
CGGGACATCG CCGCCTACAT GCGGCCGAAG ATGCTCGAGG TGTTCCCGCA ACTGGCCGGG
GTACGGATCG ACTACCAGTG GAGCGGGCTG ATCGGCATCG GCGCCAACCG CCTGCCGCAG
ATCGGCCGCC TGCCCGGACG GCCCAACGTC TACTACGCCC AGGCCTACTC CGGCCACGGG
CTGAACGCCA CCCACCTGGC CGGTCGGCTG CTCGCCGAGG CCATCGCCGG GCAACATAGC
CACGGCTTCG AACTGTTCGC CCGGGTGCCG CACCGCACCT TCCCCGGCGG CCCCCGCCTG
CGTGCGCCGC TGCTGGCCCT CGGCATGTTG TGGTACCGGC TCCGGGAGCT ATTCTGA
|
|---|
| Protein sequence | MKAALPGTSA ADDGHAPSYY AATTGPRPEF PALEGELQAD VCVVGGGFSG INTALELAER
GLSVILLEAR VLGWGASGRN GGQLIRGFGH DLERFRPLLG ADGVRALKLL GLESLEIVRR
RIERHAIDCD LTWGYCELAT RARHLEHLKA ECAELQALGY RHELRLLEAE QMHEAIGSRR
YRGGLLDRGS GHLHPLRLLL GEAAVARSLG VRLFERSAAL RIDHGQEVCV HTAGGRVRAA
SLVLAGNAHI GDLEPELAGK VLPAGSYIIA TEPLSPTLAA ELLPQNLAVS DMRVVLDYFR
LSADRRLLFG GACHYSGRDP RDIAAYMRPK MLEVFPQLAG VRIDYQWSGL IGIGANRLPQ
IGRLPGRPNV YYAQAYSGHG LNATHLAGRL LAEAIAGQHS HGFELFARVP HRTFPGGPRL
RAPLLALGML WYRLRELF
|
|---|
| |