Gene Avin_47950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47950 
Symbol 
ID7763657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4860952 
End bp4861500 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID643807639 
ProductCupin, RmlC-type protein 
Protein accessionYP_002801874 
Protein GI226946801 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACGTCG GTGTTCGACT GCAATCCATA CGCAAGCTCA AAGGCCTCTC CCAGCGTGAA 
CTCGCCAAGC GCGCGGGCGT CACCAACAGC ACCATTTCGA TGATCGAGAA GAACAGCGTC
AGCCCCTCGA TCAGTTCCCT GAAGAAGGTG CTCGGCGGTA TTCCCATGTC GCTGATGGAG
TTCTTTTCCC TCGATCTGGA GGCGGAAGCC AGCGCCCCGG TGGTCTATCG TGCCGCCGAG
CAGGCCGAGC TGTCGCGCGG GCTGCTGAGC ATGCGCCTGA TCGGCAAGGA TCATCCCGAC
CGGGCGCTCA CCTTCCTCTC GGTGACCTAT CCTCCGGGGG CCGACAGTGG CGAGGCGCTG
CTGCTGCGCG ACGGCGAGGA AGCCGGCATT CTCGTCGAAG GGCGCCTGGA ACTGCAGGTC
GGCGAGCAGC GCTACACCCT CGAGAGCGGC GACAGCTACT ACCTGGTGGC CGGCCAGCCG
CACCGTTTCC GCAACCCCTT CGAGGCCCCG GCGCAACTGA TCAGCGCCGC CACTCCGGCG
CATTTCTAG
 
Protein sequence
MDVGVRLQSI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLKKV LGGIPMSLME 
FFSLDLEAEA SAPVVYRAAE QAELSRGLLS MRLIGKDHPD RALTFLSVTY PPGADSGEAL
LLRDGEEAGI LVEGRLELQV GEQRYTLESG DSYYLVAGQP HRFRNPFEAP AQLISAATPA
HF