Gene Avin_47870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47870 
Symbol 
ID7763649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp4855712 
End bp4856389 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID643807631 
ProductSNase-like protein 
Protein accessionYP_002801866 
Protein GI226946793 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCCA GGCTGCTCGC AATCCCGCTG CTGCTCGGCT TCGCCAGTTC GCCCGTTTTC 
GCCAGCGACA TTTCCTGCCG CGTGATCGAG GTACCCGACG GCGACGCCTT CACCTGCCTG 
ACCGACACCG AAAAGCGGAT CGGCGTCCGG CTGGCGGAAA TCGACGCGCC GGAAGCCAAG 
CAGCCCCATG GCGACAAATC CCGCCAGATG CTGAGCGAGC TGGTGCTCGA GCGGAAGGTG 
GTCCTGCAAG TGCAGGAGAC CGACCGTCAT GGCCGCCTGG TGGCGCGGGC CCATGCCGGC 
ACGCGCGACA TCAATGCCGA ACTGGTCAGC CAGGGCGGCG CCTGGACCAG TTCCCGACAC 
GACAAGGACA GGAGCCTCGC GCTTCTGGAG AGCCAGGCCG AGGCGGACAA GCGTGGTCTA 
TGGGCCCTTC CCGAGGCGGA ACGGGTTCCG CCCTGGGAGT GGCGCGCCCT GGGCTGGAAC 
GAACACCCGG CACCGAGCGA AGCCAGCCCG GACATGATCG CCAAAGGCCA GGCCGCCAGC 
GGCCTGCGCT GCGGCGGGAA GCGCTTCTGC AAGGAAATGA GCAGTTGCGG CGAGGCCAAG 
TTCTACGTGG AGAACTGCGG GCCGCGCAGC CTCGATGGCG ACCGCGACGG CGTGCCCTGC 
GAGTCGCTGT GCAAATAG
 
Protein sequence
MRSRLLAIPL LLGFASSPVF ASDISCRVIE VPDGDAFTCL TDTEKRIGVR LAEIDAPEAK 
QPHGDKSRQM LSELVLERKV VLQVQETDRH GRLVARAHAG TRDINAELVS QGGAWTSSRH 
DKDRSLALLE SQAEADKRGL WALPEAERVP PWEWRALGWN EHPAPSEASP DMIAKGQAAS 
GLRCGGKRFC KEMSSCGEAK FYVENCGPRS LDGDRDGVPC ESLCK