Gene Avin_47850 details

Gene Information

• Locus tag: Avin_47850
• ID: 7763647
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4852664
• End bp: 4853392
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643807629
• Product: Pirin-like protein
• Protein accession: YP_002801864
• Protein GI: 226946791
• COG category: [R] General function prediction only
• COG ID: [COG1741] Pirin-related protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACGA CCGAACTGCG CCGCGCCAAC GAACGAGGCC GGGCCGACCA CGGCTGGCTG 
CAATCGCGCC ACAGCTTTTC CTTCGCCGAT TATCACGATC CCGAACAGAT CGGCTTCTCC 
GACCTGCGAG TGATCAACGA CGACCGCGTC GCCCCCGGCC AGGGCTTCGG CCGCCACCCG 
CACCGGGACA TGGAAATCCT CTCCTACGTG CTCGACGGCG CCCTGCAGCA CCGGGACAGC 
CTGGGTAACG GCTCGGTGAT CCGCCCCGGC GACATCCAGT TGATGCGCGC CGGCAGCGGC 
ATCGCGCACA GCGAGTTCAA CGCCTCGGAC CGCGAGCCGG TGCACTTCCT GCAGATCTGG 
ATACTGCCGG ACACCAGGGA CCTGGCGCCG GGCTACCAGC AGAAGCACTT CGCCAGTGCG 
GACAAGCGCG GCCGGCTGTG CCTGATCCTC TCGCCGGACG GTGACCGGGG TTCGCTGCGC 
ATCCATCAGG ACACCCGGGT ATACGCCGGA TTGTTCGACG GCGCGGAACG GGCCGAACTG 
GAACTCGGCG GGCAACGCCA CGCCTATGTG CATCTGGCAC GCGGTGCGCT GAACGTCAAC 
GGCCAGCGTC TGGAGGCGGG CGACGGCCTG CGCGTCCGCC ACGCCGAACG GCTGGAGTTC 
GCCGCCGGCG AACAGGCCGA GGTACTGGTC TTCGACCTGC GCCCGAACGA GTTGCCGCAG 
CGGCCGTGA 

 

Protein sequence

MSTTELRRAN ERGRADHGWL QSRHSFSFAD YHDPEQIGFS DLRVINDDRV APGQGFGRHP 
HRDMEILSYV LDGALQHRDS LGNGSVIRPG DIQLMRAGSG IAHSEFNASD REPVHFLQIW 
ILPDTRDLAP GYQQKHFASA DKRGRLCLIL SPDGDRGSLR IHQDTRVYAG LFDGAERAEL 
ELGGQRHAYV HLARGALNVN GQRLEAGDGL RVRHAERLEF AAGEQAEVLV FDLRPNELPQ 
RP