| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_47710 |
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| Symbol | dapF |
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| ID | 7763633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 4841041 |
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| End bp | 4841871 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643807615 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002801850 |
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| Protein GI | 226946777 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGC GTTTCACCAA GATGCACGGC CTCGGCAACG ACTTCATGGT CATAGACCTG
GTCACCCAGC ACGCGCACAT CCAGCCCAAG CACGCCAAGC AGTGGGGCGA CCGCCATACC
GGCATCGGCT TCGACCAGTT GCTGATCGTC GAACCGCCGA GCCGGCCGGA TGTGGACTTC
CGCTACCGTA TCTTCAACGC CGACGGCTCG GAGGTGGAAC AGTGCGGCAA CGGCGCGCGC
TGCTTCGCCC GCTTCGTGCT CGACAAGCGC CTGACGGTGA AGAAGCGCAT TCGCGTGGAA
ACCAGGAGCG GCGTCATCGA ACTGGACGTC CGCCCGGACG GCCAGGTCTG CGTCGACATG
GGCCCGCCAC GCCTCGAACC GAGGGAAATC CCCTTCCAGG CGGAGAACGC CGCCCTCGAC
TACCAGGTCG AAGTCGATGG CTGCGAGGTC GAACTCGCCG CGCTGTCCAT GGGCAATCCC
CATGCGGTGC TGCGCGTGGA GAACGTCGAA AGCGCACCGG TGCACGAGTT GGGGCCTAAA
CTGGAGCATC ATCCGCGCTT TCCGCAGCGG GTCAACGTCG GTTTCCTCCA GGTCGTCGAC
CGCCAGCACG CCAGGTTGCG CGTCTGGGAG CGTGGCGCCG GCGAAACCCA GGCCTGCGGC
ACCGGTGCCT GTGCGGCGGC GGTAGCGGCG ATCCGTCAGG GCTGGATGGA CTCGCCGGTG
CTGGTCGACC TGCCCGGTGG CCGGCTGTCC ATCGCCTGGG CCGGCCCGGA TCAGTCGGTC
ATGATGACCG GCCCGGCGGT GCGCGTATAC GAAGGCCAGG TACGTCTATG A
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| Protein sequence | MLLRFTKMHG LGNDFMVIDL VTQHAHIQPK HAKQWGDRHT GIGFDQLLIV EPPSRPDVDF
RYRIFNADGS EVEQCGNGAR CFARFVLDKR LTVKKRIRVE TRSGVIELDV RPDGQVCVDM
GPPRLEPREI PFQAENAALD YQVEVDGCEV ELAALSMGNP HAVLRVENVE SAPVHELGPK
LEHHPRFPQR VNVGFLQVVD RQHARLRVWE RGAGETQACG TGACAAAVAA IRQGWMDSPV
LVDLPGGRLS IAWAGPDQSV MMTGPAVRVY EGQVRL
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