Gene Avin_47460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47460 
Symbol 
ID7763609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4821648 
End bp4822301 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID643807591 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_002801826 
Protein GI226946753 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA AAGTTGCCGT CATCCTCTCC GGTTGCGGCG TCTACGACGG CTCCGAAATC 
TACGAGAGCG TGCTCACCCT GCTGCGCCTC GACCAGCGCG GCGCCCAGGT GCAGTGCTTC
GCGCCGAACG TTCCGCAACT GCATGTGATC GACCACTACC GCGGCGAGGA AGTACAGGAA
AGCCGCAACG TGCTGGTGGA GGCGGCACGC CTGGCCCGTG GCAACATCAA GGATGTCCGC
GAAGGCAAGG TGGAGGACTT CGATGCGCTG ATCCTGCCCG GCGGCTTCGG TGCGGCGAAG
AACCTCTCCG ACTTCGCGGT CAGCGGCGCC AACTGCACGG TGCAGCCCGA CGTGCTGGCC
TTCGCCCAGG CCTTCGCCCG GGCCGGCAAG CCGGTGGGCC TGATCTGCAT CGCGCCGGCG
CTGGCTGCGA GAATCTACGG TCCCGGCGTG GTCTGCACCA TCGGCAACGA TCCGGACACC
GCCGCCGCCC TGACCAAGAT GGGCGCCCAG CATGAAAACT GCGCGGTGGA CGAGATCGTC
GTCGACACCG AGCGCAAGCT GGTCACCACG CCTGCCTACA TGCTCGCCAA GTCGATCGGC
GAAACCGCCG GCGGCATCAA CAAGCTGGTC GATCGCGTCC TCGAACTGGC CTGA
 
Protein sequence
MSKKVAVILS GCGVYDGSEI YESVLTLLRL DQRGAQVQCF APNVPQLHVI DHYRGEEVQE 
SRNVLVEAAR LARGNIKDVR EGKVEDFDAL ILPGGFGAAK NLSDFAVSGA NCTVQPDVLA
FAQAFARAGK PVGLICIAPA LAARIYGPGV VCTIGNDPDT AAALTKMGAQ HENCAVDEIV
VDTERKLVTT PAYMLAKSIG ETAGGINKLV DRVLELA