| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_47400 |
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| Symbol | ubiD |
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| ID | 7763603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4812702 |
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| End bp | 4814168 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643807585 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_002801820 |
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| Protein GI | 226946747 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACT CCGATCTTCG CGACTTCCTG CGCGCCCTGG AGGCGCGTGG CGAGCTCAAG
CGCATCCAGA CGCCGGTCTC GCCCATACTG GAAATGACCG AAATCTGCGA TCGTACCTTG
CGTCGCAGCG GGCCCGCTCT GCTGTTCGAG AAGCCGATAG GTTTCGACAT GCCGGTGCTC
GGCAACCTGT TCGGCACACC GCAGCGCGTG GCGTTCGGCA TGGGGGCCGA GGATGTCTCC
GAACTGCGCG AGATCGGCCG GCTGCTGGCC CTCCTCAAGG AGCCGGAGCC GCCCAAGGGG
CTCAAGGATG CCTGGGACAA GCTGCCGCTT TTCAAGAAAG TGCTCAGCAT GGCGCCCAAG
GTGCTGAAGG ATGCGCCCTG CCAGGAAGTG ATCCTCGAAG GCGAGGATGT CGATCTCGGC
AGGCTGCCCG TGCAGCATTG CTGGCCAGGC GATGCCGCGC CGCTGATCAC CTGGGGGCTG
ACCATCACCC GCGGACCGAA CAAGGAGCGG CAGAACCTCG GCATCTACCG GCAGCAGGTG
CTCGGCCGCA ACAAGGTGAT CATGCGCTGG CTCAGCCACC GTGGCGGCGC CTTGGATTAC
CGCGAATGGT GCCAGAAACA CCCTGACCGG CCCTATCCGG TGGCGGTGGC GCTCGGGGCC
GACCCGGCGA CCATCCTCGG TGCGGTCACG CCGGTGCCGG ACACCCTGTC CGAATACGCC
TTCGCCGGCT TGCTGCGTGG CCAGCGTACC GAACTGGTCA AGGCGGTCGG CAGCGATCTG
CAGGTGCCGG CCAGCGCCGA GATCGTGCTG GAGGGGCACA TCCATCCGGG AGAGATGGCC
GATGAGGGGC CCTATGGCGA CCATACCGGC TACTACAACG AGGTCGACCG TTTCCCGGTG
TTCACCATCG AGCGCATCAC CCGCCGACGC GATGCCATCT ACCACAGCAC CTACACCGGA
CGTCCGCCGG ACGAGCCCGC CGTGCTCGGC GTGGCGCTGA ACGAAGTGTT CGTGCCGATC
CTGCAGAAGC AGTTCCCCGA GATCGTCGAT TTCTACCTGC CGCCGGAGGG CTGCTCCTAC
CGCATGGCGG TGGTGACCAT CAGGAAGCAG TATCCGGGCC ACGCCAAGCG GGTGATGCTG
GGGGTCTGGT CATTCCTGCG CCAGTTCATG TATACCAAGT TCGTCATCGT CACCGACGAC
GACATCGACG CCCGTGACTG GAACGATGTG ATCTGGGCCA TCACCACACG CATGGACCCC
AAGCGCGACA CCGTGCTGAT CGACAACACG CCCATCGATT ATCTCGATTT CGCCTCGCCG
GTCTCCGGCC TGGGTTCGAA GATGGGGCTG GATGCCACCC ACAAGTGGCC GGGCGAGACC
AGCCGCGAAT GGGGGCGGGC CATCCGTCAG GATCCGGCTG TGAAGCAGCG TGTCGACGAG
CTCTGGCCGC TGCTGGGCCT CGACTGA
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| Protein sequence | MKYSDLRDFL RALEARGELK RIQTPVSPIL EMTEICDRTL RRSGPALLFE KPIGFDMPVL
GNLFGTPQRV AFGMGAEDVS ELREIGRLLA LLKEPEPPKG LKDAWDKLPL FKKVLSMAPK
VLKDAPCQEV ILEGEDVDLG RLPVQHCWPG DAAPLITWGL TITRGPNKER QNLGIYRQQV
LGRNKVIMRW LSHRGGALDY REWCQKHPDR PYPVAVALGA DPATILGAVT PVPDTLSEYA
FAGLLRGQRT ELVKAVGSDL QVPASAEIVL EGHIHPGEMA DEGPYGDHTG YYNEVDRFPV
FTIERITRRR DAIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIVD FYLPPEGCSY
RMAVVTIRKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DIDARDWNDV IWAITTRMDP
KRDTVLIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET SREWGRAIRQ DPAVKQRVDE
LWPLLGLD
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