Gene Avin_46900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46900 
Symbolcca 
ID7763553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4761325 
End bp4762581 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content70% 
IMG OID643807534 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_002801770 
Protein GI226946697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATCT ACAAAGTGGG CGGCGCGGTG CGCGACCGGC TGCTCGGCCG GCCGGTCAGC 
GAGGTCGACT GGGTGGTGGT CGGCGCCAGC GCCGAAGAAC TGCTGGCCCT GGGCTACCGC
CCGGTCGGCG CGGATTTCCC GGTCTTCCTC CATCCGCGGA CCGGCGAGGA ATACGCTCTC
GCCCGCACCG AGCGGAAAAG CGGGCGCGGC TATGGCGGTT TCACCTTCCA TGCCAGCCCG
GAGGTGACCC TGGAAGAGGA CCTGCTGCGC CGCGACCTGA CCATCAACGC CATGGCCGAG
GACGAACAGG GCCGGCTGAT CGATCCCTGT CACGGCCGGC GCGATCTCGA GCAAAGGTGG
CTGCGTCACG TCTCTCCCGC CTTCGCCGAA GATCCCCTGC GCGTCCTGCG CGTGGCGCGC
TTCGCCGCCC GCTATGCACC GCTGGGGTTC CGCGTGGCTC CGGAGACCCG GGCGCTGATG
CGCCAGCTCG CCGAGTCCGG CGAACTGCAG GCGCTCACCG CCGAGCGCAG CTGGAAGGAA
ATCTCCCGCG CCCTGCTGGA GCCGCGTCCG GATGTCTTCA TCCGGACGCT GCGCGACTGC
GGCGCCCTGC ATGAGCTGCT GCCGGAAATC GATGCCCTGT TCGGCGTTCC ACAGCCGGCC
GCCCATCATC CGGAAATCGA TACCGGCGAG CACCTGCTCG CCGTGCTGCG CCAGTGCGCC
GAACACGGGC AGCCCCTGGT CGTGCGCTGG GCCTGCCTGC TCCATGACCT GGGCAAGGGA
ACGACGCCCG CCGAGGAATG GCCGCGCCAC ATCGCCCACG AGCGCAAGGG CCTGAAACTG
ATCCGCGCAG TGAACACGCG TTGCAAGGCT CCGCGCGACT GCCAGGAACT GTCCCTGCTG
GTCGGCGAAT ACCACAGCCA TTGTCACCGG GCCCTGGAAC TGCGCCCCGC CACACTGCTC
GAACTGCTGC AGCGGTTCGA CGTCTATCGC CGTCCGCAAC GCTTCGAGGA GTTCATCGCC
GCCTGCGAGA TGGATGCCCG CGGTCGTCTC GGCCTGGAAC GGCGCGATTA CCCACAGGCC
GGCTACCTGC GCGGAGCCGC CGCCGCGGCC CGGGCAGTGG CGGTCCAACC GTTGCTGGAA
AAGGGGCTCG CGGGCGCGGC CCTGGGCGAA GCGCTCAAGC GCGAGCGACT GCGGGCACTG
AAGGCCTACA AGAGCGACGT ACTGGGCGAG CGGGCCGAGC CTCCGGAGAC CTCGTGA
 
Protein sequence
MRIYKVGGAV RDRLLGRPVS EVDWVVVGAS AEELLALGYR PVGADFPVFL HPRTGEEYAL 
ARTERKSGRG YGGFTFHASP EVTLEEDLLR RDLTINAMAE DEQGRLIDPC HGRRDLEQRW
LRHVSPAFAE DPLRVLRVAR FAARYAPLGF RVAPETRALM RQLAESGELQ ALTAERSWKE
ISRALLEPRP DVFIRTLRDC GALHELLPEI DALFGVPQPA AHHPEIDTGE HLLAVLRQCA
EHGQPLVVRW ACLLHDLGKG TTPAEEWPRH IAHERKGLKL IRAVNTRCKA PRDCQELSLL
VGEYHSHCHR ALELRPATLL ELLQRFDVYR RPQRFEEFIA ACEMDARGRL GLERRDYPQA
GYLRGAAAAA RAVAVQPLLE KGLAGAALGE ALKRERLRAL KAYKSDVLGE RAEPPETS