Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_46750 |
Symbol | |
ID | 7763538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4744677 |
End bp | 4745450 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643807519 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002801755 |
Protein GI | 226946682 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.658343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACTC GCATCAATCC GTTTTGTCTC GATGGCCGGC AGGCTCTTCT GACGGGTTCC TGTCGCGGTA TCGGCTTCGA ACTGGCTCGC GGTTTGGGAC GGGCCGGAGC AAAAGTGCTT ATCAATGGCC GCGATAACGA GCGCACTCAT GCCGCCTGCG CGAAACTTCG CGATGAAGGC CTCATGGCGG AAGCGGTAGT TTTCGACGTG ACCGATTACC GACAATCCGA AACCGCGATC GACGATGTGG AAAACCGCCT CGGTCCCATC GATATATTGG TCAACAATGC CGGCATTCAG CATCGTGCCC CATTGGAAGA GTTCGCCCAT GAAAAATGGC GTGAACTCAT GCAGACCAAT CTCGATGCGG TCTTCTACGT ATCTCAGGCG GTCGCCCGTC ATATGATCGG CCGCAAACGC GGCAAGATCA TCAACATCGG TTCGGTGCAA AGCGAACTGG CACGCCCCTC GATCACACCT TATGCGGCCA GCAAAGGTGC GGTGCGCATG CTTACGCGGG GCATGTGCGC GGATTGGGCG CGTTATGGCA TTCAAACCAA TGGTCTTGCT CCGGGGTATT TCCAGACGGA ACTCAACCGC GCTTTGGTGG AGGACCGGGA ATTCTCCGAT TGGTTATGCA AACGCACACC GGCCGGCCGT TGGGGCCAGG TCGAGGAGTT GTGCGGCGCC GCGATTTTCC TCGCCTCGTC CGCCTCCGAT TTCGTCAACG GCCAGATGCT CTATGTCGAT GGCGGTCTGA CCAGCGTGGT TTGA
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Protein sequence | MSTRINPFCL DGRQALLTGS CRGIGFELAR GLGRAGAKVL INGRDNERTH AACAKLRDEG LMAEAVVFDV TDYRQSETAI DDVENRLGPI DILVNNAGIQ HRAPLEEFAH EKWRELMQTN LDAVFYVSQA VARHMIGRKR GKIINIGSVQ SELARPSITP YAASKGAVRM LTRGMCADWA RYGIQTNGLA PGYFQTELNR ALVEDREFSD WLCKRTPAGR WGQVEELCGA AIFLASSASD FVNGQMLYVD GGLTSVV
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