Gene Avin_46660 details

Gene Information

• Locus tag: Avin_46660
• Symbol: rpe
• ID: 7763529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4735475
• End bp: 4736149
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643807510
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_002801746
• Protein GI: 226946673
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCCTT TCGCCATCGC CCCGTCGATC CTGTCCGCCG ACTTCGCCCG CCTGGGCGAG 
GAAGTGGACA GGGTCCTCGC CGCCGGCGCC GATATCGTCC ACTTCGACGT GATGGACAAC 
CACTACGTGC CCAACCTGAC CATCGGCCCG ATGGTCTGCA CGGCGCTGCG CAAGTACGGC 
ATCCAGGCGC CCATCGACGT GCACCTGATG GTCAAGCCGG TCGACCGCAT CATCGGTGAC 
TTCCTGGAGG CCGGCGCCAG CTACATCACC TTCCACCCGG AAGCCTCCGA GCACATCGAC 
CGCTCGCTGC AACTGATCAG GGACGGCGGC GCCAGGGCCG GCCTGGTGTT CAACCCGGCG 
ACCCCGCTGG ACTGCCTGAA GTACGTGATG GACAAGCTCG ACATGCTGCT GCTGATGAGC 
GTCAACCCCG GCTTCGGCGG TCAGAAGTTC ATCCCCGGCA CCCTCGACAA GCTGCGCGAG 
GCGCGCGCGC TGATCGACGC CAGCGGCCGG GACATCCGCC TGGAGATCGA CGGCGGGGTC 
AACGTGAAGA ACATCGGCGA GATCGCCGCC GCCGGCGCCG ACACCTTCGT CGCCGGCTCG 
GCGATCTTCG GCCAGCCCGA CTACAAGGCG GTGATCGACG CCATGCGCGC CGAACTGGCG 
AGGGTGCGCC CGTGA 

 

Protein sequence

MQPFAIAPSI LSADFARLGE EVDRVLAAGA DIVHFDVMDN HYVPNLTIGP MVCTALRKYG 
IQAPIDVHLM VKPVDRIIGD FLEAGASYIT FHPEASEHID RSLQLIRDGG ARAGLVFNPA 
TPLDCLKYVM DKLDMLLLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR DIRLEIDGGV 
NVKNIGEIAA AGADTFVAGS AIFGQPDYKA VIDAMRAELA RVRP